Genome Explorer: Aggregatibacter aphrophilus C2008003249 (SEQF4339.1)
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NCBI Annotation for SEQF4339.1
| Genome selected: Aggregatibacter aphrophilus C2008003249 | |||
| Contigs: | 18 | Bases: | 2346261 bps |
| CDS: | 70 | rRNA: | 11 |
| tmRNA: | 1 | tRNA: | 52 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2001 | QEPY01000009.1 | RDE94528.1 | open | 1659 [NA] | 552 [AA] | 53570-55228 | DPW03_10655 | thiol reductant ABC exporter subunit CydC |
| 2002 | QEPY01000009.1 | RDE94529.1 | open | 93 [NA] | 30 [AA] | 55513-55605 | DPW03_10660 | methionine/alanine import family NSS transporter small subunit |
| 2003 | QEPY01000009.1 | RDE94530.1 | open | 1503 [NA] | 500 [AA] | 55607-57109 | DPW03_10665 | sodium-dependent transporter |
| 2004 | QEPY01000009.1 | RDE94531.1 | open | 501 [NA] | 166 [AA] | 31221-31721 | DPW03_10530 | protein disulfide oxidoreductase |
| 2005 | QEPY01000009.1 | RDE94532.1 | open | 615 [NA] | 204 [AA] | 57431-58045 | DPW03_10670 | adhesin |
| 2006 | QEPY01000010.1 | RDE94426.1 | open | 879 [NA] | 292 [AA] | 357-1235 | DPW03_10675 | succinate--CoA ligase subunit alpha |
| 2007 | QEPY01000010.1 | RDE94427.1 | open | 1170 [NA] | 389 [AA] | 1247-2416 | DPW03_10680 | ADP-forming succinate--CoA ligase subunit beta |
| 2008 | QEPY01000010.1 | RDE94428.1 | open | 1206 [NA] | 401 [AA] | 2511-3716 | DPW03_10685 | 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase |
| 2009 | QEPY01000010.1 | RDE94429.1 | open | 2805 [NA] | 934 [AA] | 3848-6652 | DPW03_10690 | 2-oxoglutarate dehydrogenase E1 component |
| 2010 | QEPY01000010.1 | RDE94430.1 | open | 639 [NA] | 212 [AA] | 6898-7536 | DPW03_10695 | MBL fold metallo-hydrolase |
| 2011 | QEPY01000010.1 | RDE94431.1 | open | 561 [NA] | 186 [AA] | 7605-8165 | DPW03_10700 | DUF882 domain-containing protein |
| 2012 | QEPY01000010.1 | RDE94432.1 | open | 1521 [NA] | 506 [AA] | 8236-9756 | DPW03_10705 | L,D-transpeptidase |
| 2013 | QEPY01000010.1 | RDE94433.1 | open | 2058 [NA] | 685 [AA] | 9841-11898 | DPW03_10710 | carboxy terminal-processing peptidase |
| 2014 | QEPY01000010.1 | RDE94434.1 | open | 642 [NA] | 213 [AA] | 11967-12608 | DPW03_10715 | RNA chaperone ProQ |
| 2015 | QEPY01000010.1 | RDE94435.1 | open | 1281 [NA] | 426 [AA] | 12808-14088 | DPW03_10720 | paraquat-inducible protein A |
| 2016 | QEPY01000010.1 | RDE94436.1 | open | 2652 [NA] | 883 [AA] | 14054-16705 | DPW03_10725 | MCE family protein |
| 2017 | QEPY01000010.1 | RDE94437.1 | open | 345 [NA] | 114 [AA] | 16993-17337 | DPW03_10730 | hypothetical protein |
| 2018 | QEPY01000010.1 | RDE94438.1 | open | 1242 [NA] | 413 [AA] | 17514-18755 | DPW03_10735 | peptidase T |
| 2019 | QEPY01000010.1 | RDE94439.1 | open | 1149 [NA] | 382 [AA] | 18993-20141 | DPW03_10740 | spermidine/putrescine ABC transporter ATP-binding protein PotA |
| 2020 | QEPY01000010.1 | RDE94440.1 | open | 861 [NA] | 286 [AA] | 20125-20985 | DPW03_10745 | spermidine/putrescine ABC transporter permease PotB |
| 2021 | QEPY01000010.1 | RDE94441.1 | open | 774 [NA] | 257 [AA] | 20985-21758 | DPW03_10750 | spermidine/putrescine ABC transporter permease PotC |
| 2022 | QEPY01000010.1 | RDE94442.1 | open | 1143 [NA] | 380 [AA] | 21844-22986 | DPW03_10755 | extracellular solute-binding protein |
| 2023 | QEPY01000010.1 | RDE94443.1 | open | 897 [NA] | 298 [AA] | 23102-23998 | DPW03_10760 | cytidine deaminase |
| 2024 | QEPY01000010.1 | RDE94444.1 | open | 1584 [NA] | 527 [AA] | 24081-25664 | DPW03_10765 | peptide chain release factor 3 |
| 2025 | QEPY01000010.1 | RDE94445.1 | open | 1014 [NA] | 337 [AA] | 26397-27410 | DPW03_10770 | porin |
| 2026 | QEPY01000010.1 | RDE94446.1 | open | 861 [NA] | 286 [AA] | 27652-28512 | DPW03_10775 | phosphoribosylaminoimidazolesuccinocarboxamide synthase |
| 2027 | QEPY01000010.1 | RDE94447.1 | open | 831 [NA] | 276 [AA] | 28577-29407 | DPW03_10780 | SDR family oxidoreductase |
| 2028 | QEPY01000010.1 | RDE94448.1 | open | 1338 [NA] | 445 [AA] | 29537-30874 | DPW03_10785 | argininosuccinate synthase |
| 2029 | QEPY01000010.1 | RDE94449.1 | open | 246 [NA] | 81 [AA] | 31123-31368 | DPW03_10790 | hypothetical protein |
| 2030 | QEPY01000010.1 | RDE94450.1 | open | 1773 [NA] | 590 [AA] | 31605-33377 | DPW03_10795 | gamma-glutamyltransferase |
| 2031 | QEPY01000010.1 | RDE94451.1 | open | 1368 [NA] | 455 [AA] | 33770-35137 | DPW03_10800 | two-component system sensor histidine kinase QseC |
| 2032 | QEPY01000010.1 | RDE94452.1 | open | 672 [NA] | 223 [AA] | 35124-35795 | DPW03_10805 | response regulator |
| 2033 | QEPY01000010.1 | RDE94453.1 | open | 432 [NA] | 143 [AA] | 35890-36321 | DPW03_10810 | TIGR00156 family protein |
| 2034 | QEPY01000010.1 | RDE94454.1 | open | 1116 [NA] | 371 [AA] | 36443-37558 | DPW03_10815 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme |
| 2035 | QEPY01000010.1 | RDE94455.1 | open | 918 [NA] | 305 [AA] | 37648-38565 | DPW03_10820 | formate dehydrogenase accessory protein FdhE |
| 2036 | QEPY01000010.1 | RDE94456.1 | open | 1977 [NA] | 658 [AA] | 38659-40635 | DPW03_10825 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
| 2037 | QEPY01000010.1 | RDE94457.1 | open | 2226 [NA] | 741 [AA] | 40838-43063 | DPW03_10830 | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
| 2038 | QEPY01000010.1 | RDE94458.1 | open | 900 [NA] | 299 [AA] | 43247-44146 | DPW03_10835 | enterochelin ABC transporter substrate-binding protein |
| 2039 | QEPY01000010.1 | RDE94459.1 | open | 966 [NA] | 321 [AA] | 44223-45188 | DPW03_10840 | ABC transporter permease |
| 2040 | QEPY01000010.1 | RDE94460.1 | open | 942 [NA] | 313 [AA] | 45178-46119 | DPW03_10845 | iron ABC transporter permease |
| 2041 | QEPY01000010.1 | RDE94461.1 | open | 759 [NA] | 252 [AA] | 46131-46889 | DPW03_10850 | ATP-binding cassette domain-containing protein |
| 2042 | QEPY01000010.1 | RDE94462.1 | open | 1086 [NA] | 361 [AA] | 49402-50487 | DPW03_10860 | ATP-binding protein |
| 2043 | QEPY01000010.1 | RDE94463.1 | open | 195 [NA] | 64 [AA] | 50642-50836 | DPW03_10865 | hypothetical protein |
| 2044 | QEPY01000010.1 | RDE94464.1 | open | 714 [NA] | 237 [AA] | 50861-51574 | DPW03_10870 | DUF2063 domain-containing protein |
| 2045 | QEPY01000010.1 | RDE94465.1 | open | 921 [NA] | 306 [AA] | 51564-52484 | DPW03_10875 | DUF692 family protein |
| 2046 | QEPY01000010.1 | RDE94466.1 | open | 237 [NA] | 78 [AA] | 52562-52798 | DPW03_10880 | hypothetical protein |
| 2047 | QEPY01000010.1 | RDE94467.1 | open | 246 [NA] | 81 [AA] | 53485-53730 | DPW03_10890 | hypothetical protein |
| 2048 | QEPY01000010.1 | RDE94468.1 | open | 459 [NA] | 152 [AA] | 53887-54345 | DPW03_10895 | hydrogenase maturation peptidase HycI |
| 2049 | QEPY01000010.1 | RDE94469.1 | open | 408 [NA] | 135 [AA] | 54335-54742 | DPW03_10900 | formate hydrogenlyase maturation protein HycH |
| 2050 | QEPY01000010.1 | RDE94470.1 | open | 354 [NA] | 117 [AA] | 55315-55668 | DPW03_10905 | DUF596 domain-containing protein |
| 2051 | QEPY01000010.1 | RDE94471.1 | open | 399 [NA] | 132 [AA] | 55756-56154 | DPW03_10910 | hypothetical protein |
| 2052 | QEPY01000010.1 | RDE94472.1 | open | 2154 [NA] | 717 [AA] | 47003-49156 | DPW03_10855 | formate dehydrogenase subunit alpha |
| 2053 | QEPY01000010.1 | RDE94473.1 | open | 441 [NA] | 146 [AA] | 52833-53273 | DPW03_10885 | DoxX family protein |
| 2054 | QEPY01000010.1 | RDE94474.1 | open | 147 [NA] | 48 [AA] | 56141-56287 | DPW03_10915 | hypothetical protein |
| 2055 | QEPY01000010.1 | RDE94475.1 | open | 76 [NA] | 25 [AA] | 56362->56437 | DPW03_10920 | IS1595 family transposase |
| 2056 | QEPY01000011.1 | RDE94371.1 | open | 954 [NA] | 317 [AA] | 481-1434 | DPW03_10925 | transaldolase |
| 2057 | QEPY01000011.1 | RDE94372.1 | open | 1998 [NA] | 665 [AA] | 1570-3567 | DPW03_10930 | transketolase |
| 2058 | QEPY01000011.1 | RDE94373.1 | open | 354 [NA] | 117 [AA] | 3740-4093 | DPW03_10935 | c-type lysozyme inhibitor |
| 2059 | QEPY01000011.1 | RDE94374.1 | open | 390 [NA] | 129 [AA] | 4167-4556 | DPW03_10940 | RidA family protein |
| 2060 | QEPY01000011.1 | RDE94375.1 | open | 459 [NA] | 152 [AA] | 4640-5098 | DPW03_10945 | recombination regulator RecX |
| 2061 | QEPY01000011.1 | RDE94376.1 | open | 1062 [NA] | 353 [AA] | 5177-6238 | DPW03_10950 | recombinase RecA |
| 2062 | QEPY01000011.1 | RDE94377.1 | open | 1926 [NA] | 641 [AA] | 6373-8298 | DPW03_10955 | ABC transporter ATP-binding protein |
| 2063 | QEPY01000011.1 | RDE94378.1 | open | 618 [NA] | 205 [AA] | 8379-8996 | DPW03_10960 | MarC family protein |
| 2064 | QEPY01000011.1 | RDE94379.1 | open | 1005 [NA] | 334 [AA] | 9130-10134 | DPW03_10965 | tryptophan--tRNA ligase |
| 2065 | QEPY01000011.1 | RDE94380.1 | open | 675 [NA] | 224 [AA] | 10256-10930 | DPW03_10970 | phosphoglycolate phosphatase |
| 2066 | QEPY01000011.1 | RDE94381.1 | open | 675 [NA] | 224 [AA] | 10933-11607 | DPW03_10975 | ribulose-phosphate 3-epimerase |
| 2067 | QEPY01000011.1 | RDE94382.1 | open | 279 [NA] | 92 [AA] | 11758-12036 | DPW03_10980 | cell division protein FtsB |
| 2068 | QEPY01000011.1 | RDE94383.1 | open | 696 [NA] | 231 [AA] | 12036-12731 | DPW03_10985 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
| 2069 | QEPY01000011.1 | RDE94384.1 | open | 480 [NA] | 159 [AA] | 12728-13207 | DPW03_10990 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
| 2070 | QEPY01000011.1 | RDE94385.1 | open | 1014 [NA] | 337 [AA] | 13204-14217 | DPW03_10995 | tRNA pseudouridine(13) synthase TruD |
| 2071 | QEPY01000011.1 | RDE94386.1 | open | 741 [NA] | 246 [AA] | 14240-14980 | DPW03_11000 | 5'/3'-nucleotidase SurE |
| 2072 | QEPY01000011.1 | RDE94387.1 | open | 576 [NA] | 191 [AA] | 15009-15584 | DPW03_11005 | DedA family protein |
| 2073 | QEPY01000011.1 | RDE94388.1 | open | 189 [NA] | 62 [AA] | 15598-15786 | DPW03_11010 | hypothetical protein |
| 2074 | QEPY01000011.1 | RDE94389.1 | open | 1209 [NA] | 402 [AA] | 15803-17011 | DPW03_11015 | murein hydrolase activator NlpD |
| 2075 | QEPY01000011.1 | RDE94390.1 | open | 1752 [NA] | 583 [AA] | 17884-19635 | DPW03_11020 | hypothetical protein |
| 2076 | QEPY01000011.1 | RDE94391.1 | open | 363 [NA] | 120 [AA] | 19639-20001 | DPW03_11025 | hypothetical protein |
| 2077 | QEPY01000011.1 | RDE94392.1 | open | 579 [NA] | 192 [AA] | 19994-20572 | DPW03_11030 | hypothetical protein |
| 2078 | QEPY01000011.1 | RDE94393.1 | open | 189 [NA] | 62 [AA] | 20559-20747 | DPW03_11035 | iduronate-2-sulfatase |
| 2079 | QEPY01000011.1 | RDE94394.1 | open | 183 [NA] | 60 [AA] | 20760-20942 | DPW03_11040 | hypothetical protein |
| 2080 | QEPY01000011.1 | RDE94395.1 | open | 588 [NA] | 195 [AA] | 20935-21522 | DPW03_11045 | host cell division inhibitor Icd-like protein |
| 2081 | QEPY01000011.1 | RDE94396.1 | open | 822 [NA] | 273 [AA] | 21576-22397 | DPW03_11050 | phage antirepressor Ant |
| 2082 | QEPY01000011.1 | RDE94397.1 | open | 231 [NA] | 76 [AA] | 22469-22699 | DPW03_11055 | hypothetical protein |
| 2083 | QEPY01000011.1 | RDE94398.1 | open | 207 [NA] | 68 [AA] | 23319-23525 | DPW03_11070 | DNA-binding protein |
| 2084 | QEPY01000011.1 | RDE94399.1 | open | 618 [NA] | 205 [AA] | 23720-24337 | DPW03_11075 | hypothetical protein |
| 2085 | QEPY01000011.1 | RDE94400.1 | open | 273 [NA] | 90 [AA] | 24349-24621 | DPW03_11080 | hypothetical protein |
| 2086 | QEPY01000011.1 | RDE94401.1 | open | 1254 [NA] | 417 [AA] | 25381-26634 | DPW03_11085 | DUF4102 domain-containing protein |
| 2087 | QEPY01000011.1 | RDE94402.1 | open | 1473 [NA] | 490 [AA] | 27095-28567 | DPW03_11090 | xylulokinase |
| 2088 | QEPY01000011.1 | RDE94403.1 | open | 1320 [NA] | 439 [AA] | 28695-30014 | DPW03_11095 | xylose isomerase |
| 2089 | QEPY01000011.1 | RDE94404.1 | open | 999 [NA] | 332 [AA] | 30272-31270 | DPW03_11100 | D-xylose ABC transporter substrate-binding protein |
| 2090 | QEPY01000011.1 | RDE94405.1 | open | 1512 [NA] | 503 [AA] | 31331-32842 | DPW03_11105 | D-xylose ABC transporter ATP-binding protein |
| 2091 | QEPY01000011.1 | RDE94406.1 | open | 1128 [NA] | 375 [AA] | 32846-33973 | DPW03_11110 | sugar ABC transporter permease |
| 2092 | QEPY01000011.1 | RDE94407.1 | open | 1176 [NA] | 391 [AA] | 34057-35232 | DPW03_11115 | xylose operon transcription regulator XylR |
| 2093 | QEPY01000011.1 | RDE94408.1 | open | 1392 [NA] | 463 [AA] | 35264-36655 | DPW03_11120 | MFS transporter |
| 2094 | QEPY01000011.1 | RDE94409.1 | open | 501 [NA] | 166 [AA] | 36672-37172 | DPW03_11125 | molybdopterin-guanine dinucleotide biosynthesis protein B |
| 2095 | QEPY01000011.1 | RDE94410.1 | open | 438 [NA] | 145 [AA] | 37248-37685 | DPW03_11130 | hypothetical protein |
| 2096 | QEPY01000011.1 | RDE94411.1 | open | 585 [NA] | 194 [AA] | 38735-39319 | DPW03_11140 | transcriptional regulator |
| 2097 | QEPY01000011.1 | RDE94412.1 | open | 576 [NA] | 191 [AA] | 39361-39936 | DPW03_11145 | RNA polymerase sigma factor RpoE |
| 2098 | QEPY01000011.1 | RDE94413.1 | open | 255 [NA] | 84 [AA] | 40070-40324 | DPW03_11150 | succinate dehydrogenase assembly factor 2 family protein |
| 2099 | QEPY01000011.1 | RDE94414.1 | open | 330 [NA] | 109 [AA] | 40365-40694 | DPW03_11155 | QacE family quaternary ammonium compound efflux SMR transporter |
| 2100 | QEPY01000011.1 | RDE94415.1 | open | 1716 [NA] | 571 [AA] | 40758-42473 | DPW03_11160 | proline--tRNA ligase |
| 2101 | QEPY01000011.1 | RDE94416.1 | open | 1395 [NA] | 464 [AA] | 42626-44020 | DPW03_11165 | L-seryl-tRNA(Sec) selenium transferase |
| 2102 | QEPY01000011.1 | RDE94417.1 | open | 1860 [NA] | 619 [AA] | 44017-45876 | DPW03_11170 | selenocysteine-specific translation elongation factor |
| 2103 | QEPY01000011.1 | RDE94418.1 | open | 912 [NA] | 303 [AA] | 45923-46834 | DPW03_11175 | DUF3298 domain-containing protein |
| 2104 | QEPY01000011.1 | RDE94419.1 | open | 1104 [NA] | 367 [AA] | 46882-47985 | DPW03_11180 | NADH-dependent flavin oxidoreductase |
| 2105 | QEPY01000011.1 | RDE94420.1 | open | 717 [NA] | 238 [AA] | 48103-48819 | DPW03_11185 | MgtC/SapB family protein |
| 2106 | QEPY01000011.1 | RDE94421.1 | open | 699 [NA] | 232 [AA] | 48824-49522 | DPW03_11190 | rRNA large subunit pseudouridine synthase E |
| 2107 | QEPY01000011.1 | RDE94422.1 | open | 2467 [NA] | 822 [AA] | 49695->52161 | DPW03_11195 | hypothetical protein |
| 2108 | QEPY01000011.1 | RDE94423.1 | open | 321 [NA] | 106 [AA] | 22696-23016 | DPW03_11060 | hypothetical protein |
| 2109 | QEPY01000011.1 | RDE94424.1 | open | 276 [NA] | 91 [AA] | 23019-23294 | DPW03_11065 | transcriptional regulator |
| 2110 | QEPY01000011.1 | RDE94425.1 | open | 957 [NA] | 318 [AA] | 37699-38655 | DPW03_11135 | sigma-E factor regulatory protein RseB |
| 2111 | QEPY01000014.1 | RDE94370.1 | open | 1182 [NA] | 393 [AA] | <1-1184 | DPW03_11215 | elongation factor Tu |
| 2112 | QEPY01000015.1 | RDE94368.1 | open | 396 [NA] | 131 [AA] | 217-612 | DPW03_11220 | hypothetical protein |
| 2113 | QEPY01000015.1 | RDE94369.1 | open | 171 [NA] | 56 [AA] | 602->773 | DPW03_11225 | HNH endonuclease |
| 2114 | QEPY01000016.1 | RDE94367.1 | open | 694 [NA] | 231 [AA] | <1->694 | DPW03_11230 | adhesin |