Genome Explorer: Schlegelella thermodepolymerans DSM 15344 (SEQF3160.1)
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NCBI Annotation for SEQF3160.1
| Genome selected: Schlegelella thermodepolymerans DSM 15344 | |||
| Contigs: | 28 | Bases: | 3835611 bps |
| CDS: | 3603 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 49 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 3501 | QQAP01000017.1 | RDH94857.1 | open | 1071 [NA] | 356 [AA] | 16030-17100 | DES46_11718 | ribose transport system permease protein/putative xylitol transport system permease protein |
| 3502 | QQAP01000017.1 | RDH94858.1 | open | 1014 [NA] | 337 [AA] | 17235-18248 | DES46_11719 | putative porin |
| 3503 | QQAP01000017.1 | RDH94859.1 | open | 1185 [NA] | 394 [AA] | 18355-19539 | DES46_11720 | crotonobetainyl-CoA:carnitine CoA-transferase CaiB-like acyl-CoA transferase |
| 3504 | QQAP01000017.1 | RDH94860.1 | open | 1179 [NA] | 392 [AA] | 19738-20916 | DES46_11721 | acetyl-CoA C-acetyltransferase |
| 3505 | QQAP01000017.1 | RDH94861.1 | open | 552 [NA] | 183 [AA] | 21011-21562 | DES46_11722 | uncharacterized protein DUF4256 |
| 3506 | QQAP01000017.1 | RDH94862.1 | open | 441 [NA] | 146 [AA] | 21559-21999 | DES46_11723 | gamma-glutamylaminecyclotransferase |
| 3507 | QQAP01000017.1 | RDH94863.1 | open | 885 [NA] | 294 [AA] | 22149-23033 | DES46_11724 | LysR family transcriptional regulator |
| 3508 | QQAP01000017.1 | RDH94864.1 | open | 1260 [NA] | 419 [AA] | 23113-24372 | DES46_11725 | lysophospholipase L1-like esterase |
| 3509 | QQAP01000017.1 | RDH94865.1 | open | 1203 [NA] | 400 [AA] | 24369-25571 | DES46_11726 | DHA1 family inner membrane transport protein |
| 3510 | QQAP01000017.1 | RDH94866.1 | open | 633 [NA] | 210 [AA] | 25579-26211 | DES46_11727 | uncharacterized membrane protein YsdA (DUF1294 family) |
| 3511 | QQAP01000017.1 | RDH94867.1 | open | 381 [NA] | 126 [AA] | 26348-26728 | DES46_11728 | hypothetical protein |
| 3512 | QQAP01000017.1 | RDH94868.1 | open | 1749 [NA] | 582 [AA] | 26751-28499 | DES46_11729 | polyhydroxyalkanoate synthase |
| 3513 | QQAP01000017.1 | RDH94869.1 | open | 312 [NA] | 103 [AA] | 28693-29004 | DES46_11730 | ElaB/YqjD/DUF883 family membrane-anchored ribosome-binding protein |
| 3514 | QQAP01000017.1 | RDH94870.1 | open | 993 [NA] | 330 [AA] | 29081-30073 | DES46_11731 | propanol-preferring alcohol dehydrogenase |
| 3515 | QQAP01000017.1 | RDH94871.1 | open | 999 [NA] | 332 [AA] | 30099-31097 | DES46_11732 | transcriptional regulator GlxA family with amidase domain |
| 3516 | QQAP01000017.1 | RDH94872.1 | open | 1146 [NA] | 381 [AA] | 31132-32277 | DES46_11733 | DJ-1/PfpI family protein |
| 3517 | QQAP01000017.1 | RDH94873.1 | open | 351 [NA] | 116 [AA] | 32298-32648 | DES46_11734 | uncharacterized protein YbaA (DUF1428 family) |
| 3518 | QQAP01000017.1 | RDH94874.1 | open | 933 [NA] | 310 [AA] | 32869-33801 | DES46_11735 | putative porin |
| 3519 | QQAP01000017.1 | RDH94875.1 | open | 459 [NA] | 152 [AA] | 34159-34617 | DES46_11736 | hypothetical protein |
| 3520 | QQAP01000017.1 | RDH94876.1 | open | 495 [NA] | 164 [AA] | 34643-35137 | DES46_11737 | hypothetical protein |
| 3521 | QQAP01000017.1 | RDH94877.1 | open | 219 [NA] | 72 [AA] | 35166-35384 | DES46_11738 | SlyX protein |
| 3522 | QQAP01000017.1 | RDH94878.1 | open | 1638 [NA] | 545 [AA] | 35418-37055 | DES46_11739 | degradasome RNA helicase subunit |
| 3523 | QQAP01000017.1 | RDH94879.1 | open | 498 [NA] | 165 [AA] | 37185-37682 | DES46_11740 | fructosamine kinase |
| 3524 | QQAP01000017.1 | RDH94880.1 | open | 363 [NA] | 120 [AA] | 37739-38101 | DES46_11741 | fructosamine kinase |
| 3525 | QQAP01000017.1 | RDH94881.1 | open | 648 [NA] | 215 [AA] | 38168-38815 | DES46_11742 | leucine efflux protein |
| 3526 | QQAP01000017.1 | RDH94882.1 | open | 2139 [NA] | 712 [AA] | 39036-41174 | DES46_11743 | alginate lyase |
| 3527 | QQAP01000017.1 | RDH94883.1 | open | 471 [NA] | 156 [AA] | 41272-41742 | DES46_11744 | hypothetical protein |
| 3528 | QQAP01000017.1 | RDH94884.1 | open | 507 [NA] | 168 [AA] | 41747-42253 | DES46_11745 | CBS domain-containing protein |
| 3529 | QQAP01000017.1 | RDH94885.1 | open | 360 [NA] | 119 [AA] | 42706-43065 | DES46_11746 | hypothetical protein |
| 3530 | QQAP01000017.1 | RDH94886.1 | open | 1008 [NA] | 335 [AA] | 43014-44021 | DES46_11747 | transcriptional regulator |
| 3531 | QQAP01000017.1 | RDH94887.1 | open | 705 [NA] | 234 [AA] | 44126-44830 | DES46_11748 | glutathione S-transferase |
| 3532 | QQAP01000017.1 | RDH94888.1 | open | 768 [NA] | 255 [AA] | 44898-45665 | DES46_11749 | ABC-2 type transport system permease protein |
| 3533 | QQAP01000017.1 | RDH94889.1 | open | 930 [NA] | 309 [AA] | 45662-46591 | DES46_11750 | ABC-2 type transport system ATP-binding protein |
| 3534 | QQAP01000017.1 | RDH94890.1 | open | 271 [NA] | 90 [AA] | 46730->47000 | DES46_11751 | hypothetical protein |
| 3535 | QQAP01000018.1 | RDH94765.1 | open | 624 [NA] | 207 [AA] | 113-736 | DES46_1181 | uracil-DNA glycosylase |
| 3536 | QQAP01000018.1 | RDH94766.1 | open | 441 [NA] | 146 [AA] | 833-1273 | DES46_1182 | enamine deaminase RidA (YjgF/YER057c/UK114 family) |
| 3537 | QQAP01000018.1 | RDH94767.1 | open | 369 [NA] | 122 [AA] | 1344-1712 | DES46_1183 | putative peroxiredoxin |
| 3538 | QQAP01000018.1 | RDH94768.1 | open | 510 [NA] | 169 [AA] | 2372-2881 | DES46_1184 | helix-turn-helix protein |
| 3539 | QQAP01000018.1 | RDH94769.1 | open | 1749 [NA] | 582 [AA] | 2885-4633 | DES46_1185 | uncharacterized protein DUF2075 |
| 3540 | QQAP01000018.1 | RDH94770.1 | open | 1257 [NA] | 418 [AA] | 5144-6400 | DES46_1186 | sodium/proton antiporter (CPA1 family) |
| 3541 | QQAP01000018.1 | RDH94771.1 | open | 1815 [NA] | 604 [AA] | 6512-8326 | DES46_1187 | AAA domain-containing protein |
| 3542 | QQAP01000018.1 | RDH94772.1 | open | 444 [NA] | 147 [AA] | 8554-8997 | DES46_1188 | glutamine amidotransferase class I |
| 3543 | QQAP01000018.1 | RDH94773.1 | open | 933 [NA] | 310 [AA] | 9505-10437 | DES46_1189 | restriction system protein |
| 3544 | QQAP01000018.1 | RDH94774.1 | open | 1458 [NA] | 485 [AA] | 10455-11912 | DES46_11810 | succinate semialdehyde dehydrogenase |
| 3545 | QQAP01000018.1 | RDH94775.1 | open | 1437 [NA] | 478 [AA] | 11960-13396 | DES46_11811 | 8-oxoguanine deaminase |
| 3546 | QQAP01000018.1 | RDH94776.1 | open | 1161 [NA] | 386 [AA] | 13417-14577 | DES46_11812 | sulfopyruvate decarboxylase TPP-binding subunit |
| 3547 | QQAP01000018.1 | RDH94777.1 | open | 996 [NA] | 331 [AA] | 14589-15584 | DES46_11813 | isopenicillin N synthase-like dioxygenase |
| 3548 | QQAP01000018.1 | RDH94778.1 | open | 1008 [NA] | 335 [AA] | 15660-16667 | DES46_11814 | ABC-type nitrate/sulfonate/bicarbonate transport system substrate-binding protein |
| 3549 | QQAP01000018.1 | RDH94779.1 | open | 777 [NA] | 258 [AA] | 16745-17521 | DES46_11815 | NitT/TauT family transport system ATP-binding protein |
| 3550 | QQAP01000018.1 | RDH94780.1 | open | 828 [NA] | 275 [AA] | 17568-18395 | DES46_11816 | NitT/TauT family transport system permease protein |
| 3551 | QQAP01000018.1 | RDH94781.1 | open | 858 [NA] | 285 [AA] | 18419-19276 | DES46_11817 | short-subunit dehydrogenase |
| 3552 | QQAP01000018.1 | RDH94782.1 | open | 717 [NA] | 238 [AA] | 19612-20328 | DES46_11818 | GntR family transcriptional regulator |
| 3553 | QQAP01000018.1 | RDH94783.1 | open | 1236 [NA] | 411 [AA] | 20445-21680 | DES46_11819 | N-carbamoyl-L-amino-acid hydrolase |
| 3554 | QQAP01000018.1 | RDH94784.1 | open | 882 [NA] | 293 [AA] | 21677-22558 | DES46_11820 | pimeloyl-ACP methyl ester carboxylesterase |
| 3555 | QQAP01000018.1 | RDH94785.1 | open | 1131 [NA] | 376 [AA] | 22572-23702 | DES46_11821 | aspartate/methionine/tyrosine aminotransferase |
| 3556 | QQAP01000018.1 | RDH94786.1 | open | 873 [NA] | 290 [AA] | 24000-24872 | DES46_11822 | NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) |
| 3557 | QQAP01000018.1 | RDH94787.1 | open | 1299 [NA] | 432 [AA] | 24877-26175 | DES46_11823 | AAA family ATP:ADP antiporter |
| 3558 | QQAP01000018.1 | RDH94788.1 | open | 426 [NA] | 141 [AA] | 26181-26606 | DES46_11824 | ADP-ribose pyrophosphatase YjhB (NUDIX family) |
| 3559 | QQAP01000018.1 | RDH94789.1 | open | 372 [NA] | 123 [AA] | 27409-27780 | DES46_11825 | helix-turn-helix protein |
| 3560 | QQAP01000019.1 | RDH94726.1 | open | 1599 [NA] | 532 [AA] | 218-1816 | DES46_1191 | hemolysin activation/secretion protein |
| 3561 | QQAP01000019.1 | RDH94727.1 | open | 543 [NA] | 180 [AA] | 1852-2394 | DES46_1192 | invasion protein IalB |
| 3562 | QQAP01000019.1 | RDH94728.1 | open | 828 [NA] | 275 [AA] | 2601-3428 | DES46_1193 | NitT/TauT family transport system permease protein |
| 3563 | QQAP01000019.1 | RDH94729.1 | open | 813 [NA] | 270 [AA] | 3453-4265 | DES46_1194 | NitT/TauT family transport system ATP-binding protein |
| 3564 | QQAP01000019.1 | RDH94730.1 | open | 1035 [NA] | 344 [AA] | 4300-5334 | DES46_1195 | NitT/TauT family transport system substrate-binding protein |
| 3565 | QQAP01000019.1 | RDH94731.1 | open | 747 [NA] | 248 [AA] | 5480-6226 | DES46_1196 | NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) |
| 3566 | QQAP01000019.1 | RDH94732.1 | open | 636 [NA] | 211 [AA] | 6239-6874 | DES46_1197 | multiple antibiotic resistance protein |
| 3567 | QQAP01000019.1 | RDH94733.1 | open | 378 [NA] | 125 [AA] | 6889-7266 | DES46_1198 | hypothetical protein |
| 3568 | QQAP01000019.1 | RDH94734.1 | open | 2112 [NA] | 703 [AA] | 7852-9963 | DES46_1199 | parallel beta helix pectate lyase-like protein |
| 3569 | QQAP01000019.1 | RDH94735.1 | open | 483 [NA] | 160 [AA] | 10023-10505 | DES46_11910 | hypothetical protein |
| 3570 | QQAP01000019.1 | RDH94736.1 | open | 795 [NA] | 264 [AA] | 10654-11448 | DES46_11911 | NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) |
| 3571 | QQAP01000019.1 | RDH94737.1 | open | 438 [NA] | 145 [AA] | 11453-11890 | DES46_11912 | uncharacterized protein YdeI (BOF family) |
| 3572 | QQAP01000019.1 | RDH94738.1 | open | 1686 [NA] | 561 [AA] | 11951-13636 | DES46_11913 | choline dehydrogenase |
| 3573 | QQAP01000019.1 | RDH94739.1 | open | 921 [NA] | 306 [AA] | 15072-15992 | DES46_11914 | hypothetical protein |
| 3574 | QQAP01000019.1 | RDH94740.1 | open | 945 [NA] | 314 [AA] | 16024->16969 | DES46_11915 | streptomycin 3'-adenylyltransferase |
| 3575 | QQAP01000020.1 | RDH94699.1 | open | 255 [NA] | 84 [AA] | 87-341 | DES46_1201 | Xre family transcriptional regulator |
| 3576 | QQAP01000020.1 | RDH94700.1 | open | 222 [NA] | 73 [AA] | 450-671 | DES46_1202 | hypothetical protein |
| 3577 | QQAP01000020.1 | RDH94701.1 | open | 210 [NA] | 69 [AA] | 968-1177 | DES46_1203 | hypothetical protein |
| 3578 | QQAP01000020.1 | RDH94702.1 | open | 219 [NA] | 72 [AA] | 1168-1386 | DES46_1204 | hypothetical protein |
| 3579 | QQAP01000020.1 | RDH94703.1 | open | 207 [NA] | 68 [AA] | 1383-1589 | DES46_1205 | hypothetical protein |
| 3580 | QQAP01000020.1 | RDH94704.1 | open | 1734 [NA] | 577 [AA] | 2174-3907 | DES46_1206 | ADP-ribose pyrophosphatase YjhB (NUDIX family) |
| 3581 | QQAP01000020.1 | RDH94705.1 | open | 1740 [NA] | 579 [AA] | 4227-5966 | DES46_1207 | uncharacterized protein DUF262 |
| 3582 | QQAP01000020.1 | RDH94706.1 | open | 873 [NA] | 290 [AA] | 6465-7337 | DES46_1208 | putative DNA-binding transcriptional regulator YafY |
| 3583 | QQAP01000020.1 | RDH94707.1 | open | 966 [NA] | 321 [AA] | 7671-8636 | DES46_1209 | IS30 family transposase |
| 3584 | QQAP01000020.1 | RDH94708.1 | open | 159 [NA] | 52 [AA] | 8695->8855 | DES46_12010 | integrase-like protein |
| 3585 | QQAP01000022.1 | RDH94679.1 | open | 1084 [NA] | 361 [AA] | <1-1084 | DES46_1221 | HAMP domain-containing protein |
| 3586 | QQAP01000022.1 | RDH94680.1 | open | 1596 [NA] | 531 [AA] | 1125-2720 | DES46_1222 | methyl-accepting chemotaxis protein |
| 3587 | QQAP01000022.1 | RDH94681.1 | open | 477 [NA] | 158 [AA] | 2742-3218 | DES46_1223 | purine-binding chemotaxis protein CheW |
| 3588 | QQAP01000022.1 | RDH94682.1 | open | 537 [NA] | 178 [AA] | 3428-3964 | DES46_1224 | purine-binding chemotaxis protein CheW |
| 3589 | QQAP01000022.1 | RDH94683.1 | open | 441 [NA] | 146 [AA] | 4068->4509 | DES46_1225 | methyl-accepting chemotaxis protein (MCP) signaling protein |
| 3590 | QQAP01000023.1 | RDH94673.1 | open | 915 [NA] | 304 [AA] | 353-1267 | DES46_1231 | LysR family transcriptional regulator |
| 3591 | QQAP01000023.1 | RDH94674.1 | open | 2298 [NA] | 765 [AA] | 1368-3665 | DES46_1232 | methionine synthase (B12-independent) |
| 3592 | QQAP01000023.1 | RDH94675.1 | open | 315 [NA] | 104 [AA] | 3924-4238 | DES46_1233 | transposase-like protein DUF772 |
| 3593 | QQAP01000024.1 | RDH94667.1 | open | 159 [NA] | 52 [AA] | <1-161 | DES46_1241 | integrase-like protein |
| 3594 | QQAP01000024.1 | RDH94668.1 | open | 825 [NA] | 274 [AA] | 463-1287 | DES46_1242 | putative AbiEii toxin of type IV toxin-antitoxin system |
| 3595 | QQAP01000024.1 | RDH94669.1 | open | 1203 [NA] | 400 [AA] | 2122-3324 | DES46_1243 | transposase |
| 3596 | QQAP01000025.1 | RDH94663.1 | open | 924 [NA] | 308 [AA] | <1-924 | DES46_1251 | putative alpha-E superfamily protein |
| 3597 | QQAP01000025.1 | RDH94664.1 | open | 1425 [NA] | 474 [AA] | 940->2364 | DES46_1252 | putative circularly permuted ATP-grasp superfamily protein |
| 3598 | QQAP01000026.1 | RDH94659.1 | open | 1075 [NA] | 358 [AA] | <1-1075 | DES46_1261 | chemoreceptor-like protein with four helix bundle sensory module |
| 3599 | QQAP01000026.1 | RDH94660.1 | open | 423 [NA] | 140 [AA] | 1339->1762 | DES46_1262 | methyl-accepting chemotaxis protein (MCP) signaling protein |
| 3600 | QQAP01000027.1 | RDH94655.1 | open | 1260 [NA] | 419 [AA] | 222-1481 | DES46_1271 | transposase-like protein |
| 3601 | QQAP01000027.1 | RDH94656.1 | open | 210 [NA] | 69 [AA] | 1422->1631 | DES46_1272 | hypothetical protein |
| 3602 | QQAP01000028.1 | RDH94653.1 | open | 78 [NA] | 25 [AA] | <1-79 | DES46_1281 | hypothetical protein |
| 3603 | QQAP01000028.1 | RDH94654.1 | open | 1007 [NA] | 335 [AA] | 188->1194 | DES46_1282 | transposase |