Genome Explorer: Caldilinea aerophila DSM 14535 (SEQF2717.1)
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Caldilinea aerophila DSM 14535 (SEQF2717.1)
NCBI Annotation for SEQF2717.1
| Genome selected: Caldilinea aerophila DSM 14535 | |||
| Contigs: | 1 | Bases: | 5144873 bps |
| CDS: | 4119 | rRNA: | 6 |
| tmRNA: | 1 | tRNA: | 48 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 4001 | AP012337.1 | BAM02041.1 | open | 744 [NA] | 247 [AA] | 5013419-5014162 | CLDAP_40010 | putative RNA methyltransferase |
| 4002 | AP012337.1 | BAM02042.1 | open | 543 [NA] | 180 [AA] | 5014174-5014716 | CLDAP_40020 | hypothetical protein |
| 4003 | AP012337.1 | BAM02043.1 | open | 1998 [NA] | 665 [AA] | 5014760-5016757 | CLDAP_40030 | cytochrome c-type biogenesis protein CcmF |
| 4004 | AP012337.1 | BAM02044.1 | open | 609 [NA] | 202 [AA] | 5017063-5017671 | CLDAP_40040 | cytochrome c biogenesis protein |
| 4005 | AP012337.1 | BAM02045.1 | open | 555 [NA] | 184 [AA] | 5017664-5018218 | CLDAP_40050 | cytochrome c-type biogenesis protein CcmH |
| 4006 | AP012337.1 | BAM02046.1 | open | 1014 [NA] | 337 [AA] | 5018531-5019544 | CLDAP_40060 | arsenite export protein |
| 4007 | AP012337.1 | BAM02047.1 | open | 804 [NA] | 267 [AA] | 5019541-5020344 | CLDAP_40070 | putative ABC transporter substrate binding protein |
| 4008 | AP012337.1 | BAM02048.1 | open | 660 [NA] | 219 [AA] | 5020359-5021018 | CLDAP_40080 | putative ABC transporter permease protein |
| 4009 | AP012337.1 | BAM02049.1 | open | 351 [NA] | 116 [AA] | 5020999-5021349 | CLDAP_40090 | hypothetical protein |
| 4010 | AP012337.1 | BAM02050.1 | open | 1173 [NA] | 390 [AA] | 5021592-5022764 | CLDAP_40100 | putative ABC transporter substrate binding protein |
| 4011 | AP012337.1 | BAM02051.1 | open | 993 [NA] | 330 [AA] | 5022875-5023867 | CLDAP_40110 | putative ABC transporter permease protein |
| 4012 | AP012337.1 | BAM02052.1 | open | 1062 [NA] | 353 [AA] | 5023857-5024918 | CLDAP_40120 | putative ABC transporter permease protein |
| 4013 | AP012337.1 | BAM02053.1 | open | 1536 [NA] | 511 [AA] | 5024915-5026450 | CLDAP_40130 | putative ABC transporter ATP-binding protein |
| 4014 | AP012337.1 | BAM02054.1 | open | 1245 [NA] | 414 [AA] | 5026568-5027812 | CLDAP_40140 | L-rhamnose isomerase |
| 4015 | AP012337.1 | BAM02055.1 | open | 1812 [NA] | 603 [AA] | 5028178-5029989 | CLDAP_40150 | oligopeptidase F |
| 4016 | AP012337.1 | BAM02056.1 | open | 996 [NA] | 331 [AA] | 5029992-5030987 | CLDAP_40160 | hypothetical protein |
| 4017 | AP012337.1 | BAM02057.1 | open | 579 [NA] | 192 [AA] | 5031273-5031851 | CLDAP_40170 | hypothetical protein |
| 4018 | AP012337.1 | BAM02058.1 | open | 1077 [NA] | 358 [AA] | 5031870-5032946 | CLDAP_40180 | thymidylate synthase ThyX |
| 4019 | AP012337.1 | BAM02059.1 | open | 510 [NA] | 169 [AA] | 5033132-5033641 | CLDAP_40190 | hypothetical protein |
| 4020 | AP012337.1 | BAM02060.1 | open | 324 [NA] | 107 [AA] | 5033638-5033961 | CLDAP_40200 | hypothetical protein |
| 4021 | AP012337.1 | BAM02061.1 | open | 312 [NA] | 103 [AA] | 5034102-5034413 | CLDAP_40210 | putative polysaccharide biosynthesis protein |
| 4022 | AP012337.1 | BAM02062.1 | open | 390 [NA] | 129 [AA] | 5035330-5035719 | CLDAP_40220 | hypothetical protein |
| 4023 | AP012337.1 | BAM02063.1 | open | 174 [NA] | 57 [AA] | 5035700-5035873 | CLDAP_40230 | hypothetical protein |
| 4024 | AP012337.1 | BAM02064.1 | open | 387 [NA] | 128 [AA] | 5036125-5036511 | CLDAP_40240 | hypothetical protein |
| 4025 | AP012337.1 | BAM02065.1 | open | 237 [NA] | 78 [AA] | 5036508-5036744 | CLDAP_40250 | hypothetical protein |
| 4026 | AP012337.1 | BAM02066.1 | open | 1275 [NA] | 424 [AA] | 5036959-5038233 | CLDAP_40260 | O-antigen polymerase family protein |
| 4027 | AP012337.1 | BAM02067.1 | open | 1995 [NA] | 664 [AA] | 5038296-5040290 | CLDAP_40270 | putative polysaccharide biosynthesis protein |
| 4028 | AP012337.1 | BAM02068.1 | open | 444 [NA] | 147 [AA] | 5040463-5040906 | CLDAP_40280 | putative polysaccharide biosynthesis protein |
| 4029 | AP012337.1 | BAM02069.1 | open | 1122 [NA] | 373 [AA] | 5041721-5042842 | CLDAP_40290 | putative aminotransferase |
| 4030 | AP012337.1 | BAM02070.1 | open | 1029 [NA] | 342 [AA] | 5043720-5044748 | CLDAP_40300 | putative glycosyltransferase |
| 4031 | AP012337.1 | BAM02071.1 | open | 1008 [NA] | 335 [AA] | 5044758-5045765 | CLDAP_40310 | putative glycosyltransferase |
| 4032 | AP012337.1 | BAM02072.1 | open | 1116 [NA] | 371 [AA] | 5048246-5049361 | CLDAP_40320 | hypothetical protein |
| 4033 | AP012337.1 | BAM02073.1 | open | 1497 [NA] | 498 [AA] | 5049407-5050903 | CLDAP_40330 | putative polysaccharide biosynthesis protein |
| 4034 | AP012337.1 | BAM02074.1 | open | 165 [NA] | 54 [AA] | 5050975-5051139 | CLDAP_40340 | hypothetical protein |
| 4035 | AP012337.1 | BAM02075.1 | open | 195 [NA] | 64 [AA] | 5051239-5051433 | CLDAP_40350 | hypothetical protein |
| 4036 | AP012337.1 | BAM02076.1 | open | 1209 [NA] | 402 [AA] | 5052613-5053821 | CLDAP_40360 | putative aminotransferase |
| 4037 | AP012337.1 | BAM02077.1 | open | 633 [NA] | 210 [AA] | 5053937-5054569 | CLDAP_40370 | putative acetyltransferase |
| 4038 | AP012337.1 | BAM02078.1 | open | 1023 [NA] | 340 [AA] | 5054644-5055666 | CLDAP_40380 | putative oxidoreductase |
| 4039 | AP012337.1 | BAM02079.1 | open | 753 [NA] | 250 [AA] | 5055860-5056612 | CLDAP_40390 | hypothetical protein |
| 4040 | AP012337.1 | BAM02080.1 | open | 384 [NA] | 127 [AA] | 5056942-5057325 | CLDAP_40400 | hypothetical protein |
| 4041 | AP012337.1 | BAM02081.1 | open | 324 [NA] | 107 [AA] | 5057351-5057674 | CLDAP_40410 | hypothetical protein |
| 4042 | AP012337.1 | BAM02082.1 | open | 180 [NA] | 59 [AA] | 5057667-5057846 | CLDAP_40420 | hypothetical protein |
| 4043 | AP012337.1 | BAM02083.1 | open | 126 [NA] | 41 [AA] | 5057861-5057986 | CLDAP_40430 | hypothetical protein |
| 4044 | AP012337.1 | BAM02084.1 | open | 168 [NA] | 55 [AA] | 5058075-5058242 | CLDAP_40440 | hypothetical protein |
| 4045 | AP012337.1 | BAM02085.1 | open | 1377 [NA] | 458 [AA] | 5058257-5059633 | CLDAP_40450 | hypothetical protein |
| 4046 | AP012337.1 | BAM02086.1 | open | 960 [NA] | 319 [AA] | 5059651-5060610 | CLDAP_40460 | cytochrome oxidase assembly family protein |
| 4047 | AP012337.1 | BAM02087.1 | open | 1722 [NA] | 573 [AA] | 5060929-5062650 | CLDAP_40470 | hypothetical protein |
| 4048 | AP012337.1 | BAM02088.1 | open | 624 [NA] | 207 [AA] | 5062697-5063320 | CLDAP_40480 | hypothetical protein |
| 4049 | AP012337.1 | BAM02089.1 | open | 243 [NA] | 80 [AA] | 5063651-5063893 | CLDAP_40490 | hypothetical protein |
| 4050 | AP012337.1 | BAM02090.1 | open | 765 [NA] | 254 [AA] | 5064057-5064821 | CLDAP_40500 | hypothetical protein |
| 4051 | AP012337.1 | BAM02091.1 | open | 378 [NA] | 125 [AA] | 5064934-5065311 | CLDAP_40510 | hypothetical protein |
| 4052 | AP012337.1 | BAM02092.1 | open | 1347 [NA] | 448 [AA] | 5065811-5067157 | CLDAP_40520 | putative aminotransferase |
| 4053 | AP012337.1 | BAM02093.1 | open | 2694 [NA] | 897 [AA] | 5067287-5069980 | CLDAP_40530 | putative cation-transporting ATPase |
| 4054 | AP012337.1 | BAM02094.1 | open | 1026 [NA] | 341 [AA] | 5070215-5071240 | CLDAP_40540 | tagatose 1,6-diphosphate aldolase |
| 4055 | AP012337.1 | BAM02095.1 | open | 1272 [NA] | 423 [AA] | 5071429-5072700 | CLDAP_40550 | peptidyl-prolyl cis-trans isomerase B |
| 4056 | AP012337.1 | BAM02096.1 | open | 186 [NA] | 61 [AA] | 5073004-5073189 | CLDAP_40560 | hypothetical protein |
| 4057 | AP012337.1 | BAM02097.1 | open | 1317 [NA] | 438 [AA] | 5073341-5074657 | CLDAP_40570 | hypothetical protein |
| 4058 | AP012337.1 | BAM02098.1 | open | 423 [NA] | 140 [AA] | 5074773-5075195 | CLDAP_40580 | putative ArsR family transcriptional regulator |
| 4059 | AP012337.1 | BAM02099.1 | open | 1344 [NA] | 447 [AA] | 5075484-5076827 | CLDAP_40590 | putative oxidoreductase |
| 4060 | AP012337.1 | BAM02100.1 | open | 1149 [NA] | 382 [AA] | 5076860-5078008 | CLDAP_40600 | arsenite export protein |
| 4061 | AP012337.1 | BAM02101.1 | open | 357 [NA] | 118 [AA] | 5078192-5078548 | CLDAP_40610 | arsenic resistance operon repressor ArsR |
| 4062 | AP012337.1 | BAM02102.1 | open | 948 [NA] | 315 [AA] | 5078775-5079722 | CLDAP_40620 | hypothetical protein |
| 4063 | AP012337.1 | BAM02103.1 | open | 642 [NA] | 213 [AA] | 5079751-5080392 | CLDAP_40630 | putative aldolase |
| 4064 | AP012337.1 | BAM02104.1 | open | 969 [NA] | 322 [AA] | 5080419-5081387 | CLDAP_40640 | D-3-phosphoglycerate dehydrogenase |
| 4065 | AP012337.1 | BAM02105.1 | open | 588 [NA] | 195 [AA] | 5081384-5081971 | CLDAP_40650 | glucose-6-phosphate isomerase |
| 4066 | AP012337.1 | BAM02106.1 | open | 729 [NA] | 242 [AA] | 5082013-5082741 | CLDAP_40660 | putative GntR family transcriptional regulator |
| 4067 | AP012337.1 | BAM02107.1 | open | 1524 [NA] | 507 [AA] | 5082886-5084409 | CLDAP_40670 | xylulose kinase |
| 4068 | AP012337.1 | BAM02108.1 | open | 861 [NA] | 286 [AA] | 5084425-5085285 | CLDAP_40680 | putative ABC transporter permease protein |
| 4069 | AP012337.1 | BAM02109.1 | open | 1002 [NA] | 333 [AA] | 5085298-5086299 | CLDAP_40690 | putative ABC transporter permease protein |
| 4070 | AP012337.1 | BAM02110.1 | open | 1491 [NA] | 496 [AA] | 5086471-5087961 | CLDAP_40700 | putative ABC transporter substrate binding protein |
| 4071 | AP012337.1 | BAM02111.1 | open | 210 [NA] | 69 [AA] | 5088346-5088555 | CLDAP_40710 | hypothetical protein |
| 4072 | AP012337.1 | BAM02112.1 | open | 1545 [NA] | 514 [AA] | 5088559-5090103 | CLDAP_40720 | putative tail sheath protein |
| 4073 | AP012337.1 | BAM02113.1 | open | 525 [NA] | 174 [AA] | 5090119-5090643 | CLDAP_40730 | hypothetical protein |
| 4074 | AP012337.1 | BAM02114.1 | open | 729 [NA] | 242 [AA] | 5090694-5091422 | CLDAP_40740 | hypothetical protein |
| 4075 | AP012337.1 | BAM02115.1 | open | 966 [NA] | 321 [AA] | 5091427-5092392 | CLDAP_40750 | hypothetical protein |
| 4076 | AP012337.1 | BAM02116.1 | open | 1362 [NA] | 453 [AA] | 5092389-5093750 | CLDAP_40760 | hypothetical protein |
| 4077 | AP012337.1 | BAM02117.1 | open | 1986 [NA] | 661 [AA] | 5093779-5095764 | CLDAP_40770 | hypothetical protein |
| 4078 | AP012337.1 | BAM02118.1 | open | 291 [NA] | 96 [AA] | 5095755-5096045 | CLDAP_40780 | hypothetical protein |
| 4079 | AP012337.1 | BAM02119.1 | open | 2043 [NA] | 680 [AA] | 5096042-5098084 | CLDAP_40790 | hypothetical protein |
| 4080 | AP012337.1 | BAM02120.1 | open | 651 [NA] | 216 [AA] | 5098117-5098767 | CLDAP_40800 | hypothetical protein |
| 4081 | AP012337.1 | BAM02121.1 | open | 291 [NA] | 96 [AA] | 5098888-5099178 | CLDAP_40810 | hypothetical protein |
| 4082 | AP012337.1 | BAM02122.1 | open | 1146 [NA] | 381 [AA] | 5099180-5100325 | CLDAP_40820 | hypothetical protein |
| 4083 | AP012337.1 | BAM02123.1 | open | 498 [NA] | 165 [AA] | 5100494-5100991 | CLDAP_40830 | hypothetical protein |
| 4084 | AP012337.1 | BAM02124.1 | open | 321 [NA] | 106 [AA] | 5100991-5101311 | CLDAP_40840 | hypothetical protein |
| 4085 | AP012337.1 | BAM02125.1 | open | 351 [NA] | 116 [AA] | 5101311-5101661 | CLDAP_40850 | hypothetical protein |
| 4086 | AP012337.1 | BAM02126.1 | open | 2526 [NA] | 841 [AA] | 5101666-5104191 | CLDAP_40860 | hypothetical protein |
| 4087 | AP012337.1 | BAM02127.1 | open | 2556 [NA] | 851 [AA] | 5104188-5106743 | CLDAP_40870 | hypothetical protein |
| 4088 | AP012337.1 | BAM02128.1 | open | 2208 [NA] | 735 [AA] | 5106885-5109092 | CLDAP_40880 | hypothetical protein |
| 4089 | AP012337.1 | BAM02129.1 | open | 3246 [NA] | 1081 [AA] | 5109127-5112372 | CLDAP_40890 | hypothetical protein |
| 4090 | AP012337.1 | BAM02130.1 | open | 1170 [NA] | 389 [AA] | 5112400-5113569 | CLDAP_40900 | hypothetical protein |
| 4091 | AP012337.1 | BAM02131.1 | open | 357 [NA] | 118 [AA] | 5113617-5113973 | CLDAP_40910 | hypothetical protein |
| 4092 | AP012337.1 | BAM02132.1 | open | 876 [NA] | 291 [AA] | 5114010-5114885 | CLDAP_40920 | putative 2-hydroxypenta-2,4-dienoate hydratase |
| 4093 | AP012337.1 | BAM02133.1 | open | 741 [NA] | 246 [AA] | 5114986-5115726 | CLDAP_40930 | putative 4-oxalocrotonate decarboxylase |
| 4094 | AP012337.1 | BAM02134.1 | open | 849 [NA] | 282 [AA] | 5115750-5116598 | CLDAP_40940 | putative 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase |
| 4095 | AP012337.1 | BAM02135.1 | open | 441 [NA] | 146 [AA] | 5116896-5117336 | CLDAP_40950 | monooxygenase NimA |
| 4096 | AP012337.1 | BAM02136.1 | open | 1029 [NA] | 342 [AA] | 5117551-5118579 | CLDAP_40960 | putative 4-hydroxy-2-oxovalerate aldolase |
| 4097 | AP012337.1 | BAM02137.1 | open | 828 [NA] | 275 [AA] | 5118576-5119403 | CLDAP_40970 | putative acetaldehyde dehydrogenase |
| 4098 | AP012337.1 | BAM02138.1 | open | 819 [NA] | 272 [AA] | 5119433-5120251 | CLDAP_40980 | putative IclR family transcriptional regulator |
| 4099 | AP012337.1 | BAM02139.1 | open | 975 [NA] | 324 [AA] | 5120624-5121598 | CLDAP_40990 | putative catechol 2,3-dioxygenase |
| 4100 | AP012337.1 | BAM02140.1 | open | 1602 [NA] | 533 [AA] | 5121651-5123252 | CLDAP_41000 | putative phenol hydroxylase |
| 4101 | AP012337.1 | BAM02141.1 | open | 528 [NA] | 175 [AA] | 5123766-5124293 | CLDAP_41010 | 50S ribosomal protein L9 |
| 4102 | AP012337.1 | BAM02142.1 | open | 1170 [NA] | 389 [AA] | 5124728-5125897 | CLDAP_41020 | hypothetical protein |
| 4103 | AP012337.1 | BAM02143.1 | open | 993 [NA] | 330 [AA] | 5125934-5126926 | CLDAP_41030 | hypothetical protein |
| 4104 | AP012337.1 | BAM02144.1 | open | 2751 [NA] | 916 [AA] | 5127027-5129777 | CLDAP_41040 | hypothetical protein |
| 4105 | AP012337.1 | BAM02145.1 | open | 1230 [NA] | 409 [AA] | 5129800-5131029 | CLDAP_41050 | acetyl-lysine deacetylase |
| 4106 | AP012337.1 | BAM02146.1 | open | 1206 [NA] | 401 [AA] | 5131033-5132238 | CLDAP_41060 | acetylornithine/succinyldiaminopimelate aminotransferase |
| 4107 | AP012337.1 | BAM02147.1 | open | 804 [NA] | 267 [AA] | 5132349-5133152 | CLDAP_41070 | acetylglutamate kinase |
| 4108 | AP012337.1 | BAM02148.1 | open | 1056 [NA] | 351 [AA] | 5133376-5134431 | CLDAP_41080 | N-acetyl-gamma-glutamyl-phosphate reductase |
| 4109 | AP012337.1 | BAM02149.1 | open | 726 [NA] | 241 [AA] | 5134711-5135436 | CLDAP_41090 | putative OmpR family two-component response regulator |
| 4110 | AP012337.1 | BAM02150.1 | open | 876 [NA] | 291 [AA] | 5135683-5136558 | CLDAP_41100 | 30S ribosomal protein S2 |
| 4111 | AP012337.1 | BAM02151.1 | open | 600 [NA] | 199 [AA] | 5136595-5137194 | CLDAP_41110 | elongation factor Ts |
| 4112 | AP012337.1 | BAM02152.1 | open | 720 [NA] | 239 [AA] | 5137321-5138040 | CLDAP_41120 | uridylate kinase |
| 4113 | AP012337.1 | BAM02153.1 | open | 558 [NA] | 185 [AA] | 5138238-5138795 | CLDAP_41130 | ribosome-recycling factor |
| 4114 | AP012337.1 | BAM02154.1 | open | 750 [NA] | 249 [AA] | 5138815-5139564 | CLDAP_41140 | undecaprenyl pyrophosphate synthase |
| 4115 | AP012337.1 | BAM02155.1 | open | 867 [NA] | 288 [AA] | 5139617-5140483 | CLDAP_41150 | phosphatidate cytidylyltransferase |
| 4116 | AP012337.1 | BAM02156.1 | open | 681 [NA] | 226 [AA] | 5140490-5141170 | CLDAP_41160 | ribulose-phosphate 3-epimerase |
| 4117 | AP012337.1 | BAM02157.1 | open | 831 [NA] | 276 [AA] | 5141214-5142044 | CLDAP_41170 | putative hydrolase |
| 4118 | AP012337.1 | BAM02158.1 | open | 372 [NA] | 123 [AA] | 5142070-5142441 | CLDAP_41180 | hypothetical protein |
| 4119 | AP012337.1 | BAM02159.1 | open | 1140 [NA] | 379 [AA] | 5142588-5143727 | CLDAP_41190 | hypothetical protein |