Genome Explorer: Lactococcus lactis str. TIFN4 (SEQF2561.1)
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Lactococcus lactis TIFN4 (SEQF2561.1)
NCBI Annotation for SEQF2561.1
| Genome selected: Lactococcus lactis str. TIFN4 | |||
| Contigs: | 182 | Bases: | 2550393 bps |
| CDS: | 2598 | rRNA: | 20 |
| tmRNA: | 0 | tRNA: | 61 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2501 | ATBD01000176.1 | EQC53291.1 | open | 558 [NA] | 185 [AA] | 143-700 | LLDT4_13735 | transposase |
| 2502 | ATBD01000176.1 | EQC53292.1 | open | 146 [NA] | 48 [AA] | <1-146 | LLDT4_13730 | hypothetical protein |
| 2503 | ATBD01000177.1 | EQC53284.1 | open | 342 [NA] | 113 [AA] | 341-682 | LLDT4_13740 | hypothetical protein |
| 2504 | ATBD01000177.1 | EQC53285.1 | open | 1035 [NA] | 344 [AA] | 722-1756 | LLDT4_13745 | hypothetical protein |
| 2505 | ATBD01000177.1 | EQC53286.1 | open | 360 [NA] | 119 [AA] | 1926->2285 | LLDT4_13750 | hypothetical protein |
| 2506 | ATBD01000178.1 | EQC53266.1 | open | 1560 [NA] | 519 [AA] | 372-1931 | LLDT4_00515 | gluconokinase |
| 2507 | ATBD01000178.1 | EQC53267.1 | open | 909 [NA] | 302 [AA] | 2052-2960 | LLDT4_00520 | 6-phosphogluconate dehydrogenase |
| 2508 | ATBD01000178.1 | EQC53268.1 | open | 849 [NA] | 282 [AA] | 3321-4169 | LLDT4_00525 | transcriptional regulator |
| 2509 | ATBD01000178.1 | EQC53269.1 | open | 323 [NA] | 108 [AA] | <1-323 | LLDT4_00510 | hypothetical protein |
| 2510 | ATBD01000178.1 | EQC53270.1 | open | 309 [NA] | 102 [AA] | 4207-4515 | LLDT4_00530 | hypothetical protein |
| 2511 | ATBD01000179.1 | EQC53186.1 | open | 774 [NA] | 257 [AA] | 28-801 | LLDT4_01710 | metallophosphoesterase |
| 2512 | ATBD01000179.1 | EQC53187.1 | open | 246 [NA] | 81 [AA] | 1001-1246 | LLDT4_01715 | 30S ribosomal protein S18 |
| 2513 | ATBD01000179.1 | EQC53188.1 | open | 501 [NA] | 166 [AA] | 1420-1920 | LLDT4_01720 | single-stranded DNA-binding protein |
| 2514 | ATBD01000179.1 | EQC53189.1 | open | 294 [NA] | 97 [AA] | 1950-2243 | LLDT4_01725 | 30S ribosomal protein S6 |
| 2515 | ATBD01000179.1 | EQC53190.1 | open | 855 [NA] | 284 [AA] | 2435-3289 | LLDT4_01730 | UDP pyrophosphate phosphatase |
| 2516 | ATBD01000179.1 | EQC53191.1 | open | 1467 [NA] | 488 [AA] | 3811-5277 | LLDT4_01735 | gamma-aminobutyrate permease |
| 2517 | ATBD01000179.1 | EQC53192.1 | open | 1659 [NA] | 552 [AA] | 5312-6970 | LLDT4_01740 | DNA polymerase III subunit gamma/tau |
| 2518 | ATBD01000179.1 | EQC53193.1 | open | 642 [NA] | 213 [AA] | 7019-7660 | LLDT4_01745 | aminoglycoside phosphotransferase |
| 2519 | ATBD01000179.1 | EQC53194.1 | open | 489 [NA] | 162 [AA] | 7692-8180 | LLDT4_01750 | 30S ribosomal protein S1 |
| 2520 | ATBD01000179.1 | EQC53195.1 | open | 273 [NA] | 90 [AA] | 8264-8536 | LLDT4_01755 | hypothetical protein |
| 2521 | ATBD01000179.1 | EQC53196.1 | open | 447 [NA] | 148 [AA] | 8625-9071 | LLDT4_01760 | hypothetical protein |
| 2522 | ATBD01000179.1 | EQC53197.1 | open | 201 [NA] | 66 [AA] | 9289-9489 | LLDT4_01765 | hypothetical protein |
| 2523 | ATBD01000179.1 | EQC53198.1 | open | 1341 [NA] | 446 [AA] | 9548-10888 | LLDT4_01770 | glutamine synthetase |
| 2524 | ATBD01000179.1 | EQC53199.1 | open | 369 [NA] | 122 [AA] | 10950-11318 | LLDT4_01775 | MerR family transcriptional regulator |
| 2525 | ATBD01000179.1 | EQC53200.1 | open | 438 [NA] | 145 [AA] | 11416-11853 | LLDT4_01780 | phosphatase |
| 2526 | ATBD01000179.1 | EQC53201.1 | open | 1002 [NA] | 333 [AA] | 15661-16662 | LLDT4_01810 | Holliday junction DNA helicase RuvB |
| 2527 | ATBD01000179.1 | EQC53202.1 | open | 594 [NA] | 197 [AA] | 16788-17381 | LLDT4_01815 | Holliday junction DNA helicase RuvA |
| 2528 | ATBD01000179.1 | EQC53203.1 | open | 2088 [NA] | 695 [AA] | 17494-19581 | LLDT4_01820 | DNA mismatch repair protein MutL |
| 2529 | ATBD01000179.1 | EQC53204.1 | open | 696 [NA] | 231 [AA] | 19593-20288 | LLDT4_01825 | hypothetical protein |
| 2530 | ATBD01000179.1 | EQC53205.1 | open | 2523 [NA] | 840 [AA] | 20403-22925 | LLDT4_01830 | DNA mismatch repair protein MutS |
| 2531 | ATBD01000179.1 | EQC53206.1 | open | 348 [NA] | 115 [AA] | 23119-23466 | LLDT4_01835 | hypothetical protein |
| 2532 | ATBD01000179.1 | EQC53207.1 | open | 207 [NA] | 68 [AA] | 26329-26535 | LLDT4_01865 | hypothetical protein |
| 2533 | ATBD01000179.1 | EQC53208.1 | open | 378 [NA] | 125 [AA] | 26894-27271 | LLDT4_01875 | membrane protein |
| 2534 | ATBD01000179.1 | EQC53209.1 | open | 852 [NA] | 283 [AA] | 27271-28122 | LLDT4_01880 | permease |
| 2535 | ATBD01000179.1 | EQC53210.1 | open | 180 [NA] | 59 [AA] | 28308-28487 | LLDT4_01885 | hypothetical protein |
| 2536 | ATBD01000179.1 | EQC53211.1 | open | 1512 [NA] | 503 [AA] | 28558-30069 | LLDT4_01890 | glucose-6-phosphate 1-dehydrogenase |
| 2537 | ATBD01000179.1 | EQC53212.1 | open | 528 [NA] | 175 [AA] | 30261-30788 | LLDT4_01895 | HAD family hydrolase |
| 2538 | ATBD01000179.1 | EQC53213.1 | open | 165 [NA] | 54 [AA] | 11997-12161 | LLDT4_01785 | hypothetical protein |
| 2539 | ATBD01000179.1 | EQC53214.1 | open | 618 [NA] | 205 [AA] | 12266-12883 | LLDT4_01790 | ABC transporter ATP-binding protein |
| 2540 | ATBD01000179.1 | EQC53215.1 | open | 1185 [NA] | 394 [AA] | 12880-14064 | LLDT4_01795 | ABC transporter permease |
| 2541 | ATBD01000179.1 | EQC53216.1 | open | 93 [NA] | 30 [AA] | 14328-14420 | LLDT4_01800 | hypothetical protein |
| 2542 | ATBD01000179.1 | EQC53217.1 | open | 885 [NA] | 294 [AA] | 14640-15524 | LLDT4_01805 | transcriptional regulator |
| 2543 | ATBD01000179.1 | EQC53218.1 | open | 99 [NA] | 32 [AA] | 23624-23722 | LLDT4_01840 | hypothetical protein |
| 2544 | ATBD01000179.1 | EQC53219.1 | open | 309 [NA] | 102 [AA] | 23835-24143 | LLDT4_01845 | transcriptional regulator |
| 2545 | ATBD01000179.1 | EQC53220.1 | open | 954 [NA] | 317 [AA] | 24270-25223 | LLDT4_01850 | hypothetical protein |
| 2546 | ATBD01000179.1 | EQC53221.1 | open | 120 [NA] | 39 [AA] | 25233-25352 | LLDT4_01855 | hypothetical protein |
| 2547 | ATBD01000179.1 | EQC53222.1 | open | 882 [NA] | 293 [AA] | 25406-26287 | LLDT4_01860 | oxidoreductase |
| 2548 | ATBD01000179.1 | EQC53223.1 | open | 460 [NA] | 153 [AA] | 30945->31404 | LLDT4_01900 | hypothetical protein |
| 2549 | ATBD01000180.1 | EQC53167.1 | open | 203 [NA] | 67 [AA] | <1-203 | LLDT4_13755 | DNA-binding protein |
| 2550 | ATBD01000180.1 | EQC53168.1 | open | 345 [NA] | 114 [AA] | 210-554 | LLDT4_13760 | hypothetical protein |
| 2551 | ATBD01000180.1 | EQC53169.1 | open | 144 [NA] | 47 [AA] | 547->692 | LLDT4_13765 | hypothetical protein |
| 2552 | ATBD01000181.1 | EQC53123.1 | open | 393 [NA] | 130 [AA] | 13646-14038 | LLDT4_13825 | 30S ribosomal protein S9 |
| 2553 | ATBD01000181.1 | EQC53124.1 | open | 447 [NA] | 148 [AA] | 14058-14504 | LLDT4_13830 | 50S ribosomal protein L13 |
| 2554 | ATBD01000181.1 | EQC53125.1 | open | 1074 [NA] | 357 [AA] | 14871-15944 | LLDT4_13835 | ABC transporter permease |
| 2555 | ATBD01000181.1 | EQC53126.1 | open | 672 [NA] | 223 [AA] | 15953-16624 | LLDT4_13840 | peptide ABC transporter ATP-binding protein |
| 2556 | ATBD01000181.1 | EQC53127.1 | open | 879 [NA] | 292 [AA] | 16769-17647 | LLDT4_13845 | ribonuclease HIII |
| 2557 | ATBD01000181.1 | EQC53128.1 | open | 627 [NA] | 208 [AA] | 17659-18285 | LLDT4_13850 | signal peptidase |
| 2558 | ATBD01000181.1 | EQC53129.1 | open | 816 [NA] | 271 [AA] | 18335-19150 | LLDT4_13855 | purine operon repressor |
| 2559 | ATBD01000181.1 | EQC53130.1 | open | 2130 [NA] | 709 [AA] | 19499-21628 | LLDT4_13860 | elongation factor P |
| 2560 | ATBD01000181.1 | EQC53131.1 | open | 468 [NA] | 155 [AA] | 21893-22360 | LLDT4_13865 | 30S ribosomal protein S7 |
| 2561 | ATBD01000181.1 | EQC53132.1 | open | 414 [NA] | 137 [AA] | 22379-22792 | LLDT4_13870 | 30S ribosomal protein S12 |
| 2562 | ATBD01000181.1 | EQC53133.1 | open | 1308 [NA] | 435 [AA] | 23120-24427 | LLDT4_13875 | D-alanyl-D-alanine carboxypeptidase |
| 2563 | ATBD01000181.1 | EQC53134.1 | open | 888 [NA] | 295 [AA] | 24501-25388 | LLDT4_13880 | sugar transporter |
| 2564 | ATBD01000181.1 | EQC53135.1 | open | 591 [NA] | 196 [AA] | 25513-26103 | LLDT4_13885 | SAM-dependent methyltransferase |
| 2565 | ATBD01000181.1 | EQC53136.1 | open | 942 [NA] | 313 [AA] | 26234-27175 | LLDT4_13890 | hypothetical protein |
| 2566 | ATBD01000181.1 | EQC53137.1 | open | 2715 [NA] | 904 [AA] | 766-3480 | LLDT4_13775 | type III restriction endonuclease |
| 2567 | ATBD01000181.1 | EQC53138.1 | open | 1884 [NA] | 627 [AA] | 3482-5365 | LLDT4_13780 | hypothetical protein |
| 2568 | ATBD01000181.1 | EQC53139.1 | open | 1185 [NA] | 394 [AA] | 5574-6758 | LLDT4_13785 | hypothetical protein |
| 2569 | ATBD01000181.1 | EQC53140.1 | open | 1227 [NA] | 408 [AA] | 6873-8099 | LLDT4_13790 | hypothetical protein |
| 2570 | ATBD01000181.1 | EQC53141.1 | open | 282 [NA] | 93 [AA] | 8269-8550 | LLDT4_13795 | hypothetical protein |
| 2571 | ATBD01000181.1 | EQC53142.1 | open | 342 [NA] | 113 [AA] | 8572-8913 | LLDT4_13800 | hypothetical protein |
| 2572 | ATBD01000181.1 | EQC53143.1 | open | 1359 [NA] | 452 [AA] | 8906-10264 | LLDT4_13805 | cell division protein FtsK |
| 2573 | ATBD01000181.1 | EQC53144.1 | open | 1491 [NA] | 496 [AA] | 10528-12018 | LLDT4_13810 | ATPase AAA |
| 2574 | ATBD01000181.1 | EQC53145.1 | open | 192 [NA] | 63 [AA] | 12251-12442 | LLDT4_13815 | DNA-binding protein |
| 2575 | ATBD01000181.1 | EQC53146.1 | open | 1050 [NA] | 349 [AA] | 12534-13583 | LLDT4_13820 | integrase |
| 2576 | ATBD01000182.1 | EQC53096.1 | open | 534 [NA] | 177 [AA] | 548-1081 | LLDT4_13920 | phenolic acid decarboxylase padC |
| 2577 | ATBD01000182.1 | EQC53097.1 | open | 1041 [NA] | 346 [AA] | 1535-2575 | LLDT4_13925 | phenylalanyl-tRNA synthase subunit alpha |
| 2578 | ATBD01000182.1 | EQC53098.1 | open | 2394 [NA] | 797 [AA] | 2612-5005 | LLDT4_13930 | phenylalanyl-tRNA synthase subunit beta |
| 2579 | ATBD01000182.1 | EQC53099.1 | open | 1065 [NA] | 354 [AA] | 5232-6296 | LLDT4_13935 | aspartate protease |
| 2580 | ATBD01000182.1 | EQC53100.1 | open | 924 [NA] | 307 [AA] | 6356-7279 | LLDT4_13940 | GTPase RsgA |
| 2581 | ATBD01000182.1 | EQC53101.1 | open | 261 [NA] | 86 [AA] | 7251-7511 | LLDT4_13945 | hypothetical protein |
| 2582 | ATBD01000182.1 | EQC53102.1 | open | 258 [NA] | 85 [AA] | 7508-7765 | LLDT4_13950 | hypothetical protein |
| 2583 | ATBD01000182.1 | EQC53103.1 | open | 651 [NA] | 216 [AA] | 7824-8474 | LLDT4_13955 | ribulose-phosphate 3-epimerase |
| 2584 | ATBD01000182.1 | EQC53104.1 | open | 1305 [NA] | 434 [AA] | 8566-9870 | LLDT4_13960 | RmuC family endonuclease |
| 2585 | ATBD01000182.1 | EQC53105.1 | open | 945 [NA] | 314 [AA] | 10117-11061 | LLDT4_13965 | 3'-5' exoribonuclease |
| 2586 | ATBD01000182.1 | EQC53106.1 | open | 870 [NA] | 289 [AA] | 11375-12244 | LLDT4_13970 | LacX protein, plasmid |
| 2587 | ATBD01000182.1 | EQC53107.1 | open | 561 [NA] | 186 [AA] | 13296-13856 | LLDT4_13975 | adenosylhomocysteinase |
| 2588 | ATBD01000182.1 | EQC53108.1 | open | 1089 [NA] | 362 [AA] | 15002-16090 | LLDT4_13985 | cystathionine beta-lyase |
| 2589 | ATBD01000182.1 | EQC53109.1 | open | 1164 [NA] | 387 [AA] | 16337-17500 | LLDT4_13990 | cysteine desulfhydrase |
| 2590 | ATBD01000182.1 | EQC53110.1 | open | 1140 [NA] | 379 [AA] | 17555-18694 | LLDT4_13995 | sodium:proton antiporter |
| 2591 | ATBD01000182.1 | EQC53111.1 | open | 636 [NA] | 211 [AA] | 18920-19555 | LLDT4_14000 | uracil phosphoribosyltransferase |
| 2592 | ATBD01000182.1 | EQC53112.1 | open | 609 [NA] | 202 [AA] | 19696-20304 | LLDT4_14005 | hypothetical protein |
| 2593 | ATBD01000182.1 | EQC53113.1 | open | 318 [NA] | 105 [AA] | 21730-22047 | LLDT4_14015 | ribonucleotide reductase |
| 2594 | ATBD01000182.1 | EQC53114.1 | open | 1941 [NA] | 646 [AA] | 22591-24531 | LLDT4_14020 | threonyl-tRNA synthase |
| 2595 | ATBD01000182.1 | EQC53115.1 | open | 660 [NA] | 219 [AA] | 24638-25297 | LLDT4_14025 | membrane protein |
| 2596 | ATBD01000182.1 | EQC53116.1 | open | 225 [NA] | 74 [AA] | 12-236 | LLDT4_13915 | hypothetical protein |
| 2597 | ATBD01000182.1 | EQC53117.1 | open | 966 [NA] | 321 [AA] | 14006-14971 | LLDT4_13980 | homoserine O-succinyltransferase |
| 2598 | ATBD01000182.1 | EQC53118.1 | open | 1263 [NA] | 420 [AA] | 20410-21672 | LLDT4_14010 | manganese transporter |