HOMD Banner
Taxonomy: V4.0   |  16S rRNA RefSeq: V16.01   |  Genomic RefSeq: V11.01
Species: Weeksellaceae [G1] bacterium HMT-931 (HMT-931)
Download Options
Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Weeksellaceae [G1]; Weeksellaceae [G1] bacterium HMT-931
Oral:
SUBP-- Subgingival Plaque SUPP -- Supragingival Plaque PERIO -- Periodontal AKE -- Attached Keratinized Gingiva BMU -- Buccal Mucosa
HPA -- Hard Palate SAL -- Saliva THR -- Throat PTO -- Palatine Tonsils TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease RRC -- R_Retroauricular Crease LAF -- L_Antecubital Fossa RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus MVA -- Mid Vagina PFO -- Posterior Fornix
Gut:
STO -- Stool
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0000.0000.1730.0740.0000.0160.0270.0460.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.5040.1120.0000.0570.0670.0720.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0000.0000.5220.2540.0000.0470.0810.2370.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)0.0000.00051.74850.6850.00026.15428.86942.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000

HMP 16S RefSeq (V3-V5) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0000.0000.4870.2390.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0001.1000.5260.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0000.0001.9640.7830.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)0.0000.00052.09951.6130.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000

Dewhirst (35x9) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.0000.0000.0040.0020.0000.0010.0050.0080.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0040.0020.0000.0000.0200.0180.0000.000
Stdev0.0010.0000.0210.0110.0010.0050.0100.0210.0010.000
Prev(%)5.4050.00016.27920.0003.57110.00033.33332.2582.5000.000

HMP Metaphlan (not published)
No Notes

Eren V1-V3 www.pnas.org
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.0020.0010.1030.0730.0020.0150.0490.0960.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.1690.1100.0040.0250.0570.1110.0000.000
Stdev0.0140.0050.5070.2380.0090.0570.2030.4640.0020.000
Prev(%)5.1953.89628.57131.16910.39016.88320.77931.1691.2990.000

Eren V3-V5 www.pnas.org
No Notes