HOMD ::species::Prevotella sp. HMT-396

Species: Prevotella sp. HMT-396 (HMT-396)

Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella sp. HMT-396

LINKS: Ecology Home | HMT-396: Body Sites Data | HMT-396: Taxon Description | Life Page: Prevotella sp. HMT-396

Oral:	SUBP-- Subgingival Plaque	SUPP -- Supragingival Plaque	PERIO -- Periodontal	AKE -- Attached Keratinized Gingiva	BMU -- Buccal Mucosa
Oral:	HPA -- Hard Palate	SAL -- Saliva	THR -- Throat	PTO -- Palatine Tonsils	TDO -- Tongue Dorsum
Nasal:	ANA -- Anterior Nares
Skin:	LRC -- L_Retroauricular Crease	RRC -- R_Retroauricular Crease	LAF -- L_Antecubital Fossa	RAF -- R_Antecubital Fossa
Vaginal:	VIN -- Vaginal Introitus	MVA -- Mid Vagina	PFO -- Posterior Fornix
Gut:	STO -- Stool

Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

HMP 16S RefSeq (V1-V3) (not published)

No Notes

HMP 16S RefSeq (V3-V5) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.000	0.000	0.000	0.000	0.000	0.244	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.000	0.000	0.647	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.000	0.000	0.000	0.000	0.000	0.451	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Prev(%)	0.000	0.000	0.000	0.000	0.000	64.881	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.003	0.001	0.027	0.009	0.020	0.088	0.036	0.035	0.055	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.006	0.000	0.000	0.000
90^thp	0.004	0.003	0.053	0.027	0.060	0.245	0.102	0.105	0.114	0.000
Stdev	0.012	0.003	0.073	0.016	0.031	0.164	0.038	0.039	0.092	0.000
Prev(%)	20.270	23.529	37.209	48.571	64.286	82.000	93.939	83.871	82.500	0.000

HMP Metaphlan (not published)

No Notes

Eren V1-V3 www.pnas.org

No Notes

Eren V3-V5 www.pnas.org

** View Notes (mouse over) **

Notes:
Reads equally close to P. sp. HMT 305 and 396 were assigned half to each taxon.

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.006	0.004	0.004	0.017	0.052	0.244	0.111	0.082	0.083	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.001	0.061	0.155	0.598	0.281	0.206	0.236	0.000
Stdev	0.027	0.027	0.015	0.036	0.081	0.411	0.195	0.141	0.128	0.000
Prev(%)	8.108	6.081	10.135	31.757	54.730	74.324	64.865	62.838	59.459	0.000

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