HOMD ::species::Prevotella sp. HMT-314

Species: Prevotella sp. HMT-314 (HMT-314)

Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella sp. HMT-314

LINKS: Ecology Home | HMT-314: Body Sites Data | HMT-314: Taxon Description | Life Page: Prevotella sp. HMT-314

Oral:	SUBP-- Subgingival Plaque	SUPP -- Supragingival Plaque	PERIO -- Periodontal	AKE -- Attached Keratinized Gingiva	BMU -- Buccal Mucosa
Oral:	HPA -- Hard Palate	SAL -- Saliva	THR -- Throat	PTO -- Palatine Tonsils	TDO -- Tongue Dorsum
Nasal:	ANA -- Anterior Nares
Skin:	LRC -- L_Retroauricular Crease	RRC -- R_Retroauricular Crease	LAF -- L_Antecubital Fossa	RAF -- R_Antecubital Fossa
Vaginal:	VIN -- Vaginal Introitus	MVA -- Mid Vagina	PFO -- Posterior Fornix
Gut:	STO -- Stool

Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

HMP 16S RefSeq (V1-V3) (not published)

No Notes

HMP 16S RefSeq (V3-V5) (not published)

No Notes

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.046	0.048	0.087	0.110	0.323	0.369	0.730	0.613	0.709	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.027	0.011	0.000	0.000
90^thp	0.077	0.194	0.373	0.397	0.755	1.164	1.585	1.600	1.746	0.000
Stdev	0.165	0.125	0.201	0.196	0.480	0.460	0.661	0.646	0.957	0.001
Prev(%)	50.000	47.059	58.140	71.429	85.714	88.000	96.970	93.548	85.000	5.000

HMP Metaphlan (not published)

No Notes

Eren V1-V3 www.pnas.org

** View Notes (mouse over) **

Notes:
reads equally close to P. sp. HMT 306 and P. sp. HMT 314 were assigned half to each taxon

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.000	0.000	0.000	0.010	0.057	0.054	0.113	0.080	0.046	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.015	0.197	0.140	0.471	0.213	0.162	0.000
Stdev	0.002	0.001	0.002	0.038	0.130	0.133	0.212	0.200	0.110	0.000
Prev(%)	3.896	1.299	3.896	15.584	40.260	41.558	44.156	42.857	40.260	0.000

Eren V3-V5 www.pnas.org

** View Notes (mouse over) **

Notes:
Reads equally close to P. melaninogenica, P. scopos, and P. sp. HMT 313 and 314 were assigned one-fourth to each taxon.

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.121	0.051	0.052	0.187	0.874	1.023	0.989	0.761	1.324	0.000
10^thp	0.000	0.000	0.000	0.009	0.091	0.228	0.096	0.063	0.133	0.000
90^thp	0.290	0.161	0.132	0.453	2.048	2.194	2.058	1.772	2.831	0.000
Stdev	0.343	0.101	0.161	0.303	0.928	0.927	1.048	0.858	1.219	0.000
Prev(%)	63.514	61.486	54.730	93.243	97.297	99.324	96.622	97.297	98.649	0.699

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