HOMD ::Species:Patescibacteria [C1 O1 F1 G1] bacterium HMT-872

Taxonomy: V4.2 | 16S rRNA RefSeq: V16.03 | Genomic RefSeq: V11.02 | Viruses: V1.2

Species: Patescibacteria [C1 O1 F1 G1] bacterium HMT-872 (HMT-872)

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Full Lineage: Bacteria; Patescibacteria; Patescibacteria [C1]; Patescibacteria [C1 O1]; Patescibacteria [C1 O1 F1]; Patescibacteria [C1 O1 F1 G1]; Patescibacteria [C1 O1 F1 G1] bacterium HMT-872 Each rank name is a link to abundance plots at that rank:

LINKS: Ecology Home | HMT-872: Body Sites Data | HMT-872: Taxon Description | Life Page: Patescibacteria [C1 O1 F1 G1] bacterium HMT-872

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Eren V1-V3 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.152	0.169	0.001	0.007	0.008	0.054	0.006	0.002	0.001	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.555	0.469	0.000	0.017	0.018	0.148	0.008	0.000	0.000	0.000
Stdev	0.389	0.384	0.004	0.024	0.033	0.126	0.021	0.007	0.006	0.000
Prev(%)	37.662	41.558	2.597	15.584	15.584	40.260	10.390	6.494	3.896	0.000

Eren V3-V5 www.pnas.org (data from healthy subjects)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.076	0.133	0.000	0.008	0.000	0.054	0.000	0.000	0.000	0.000	0.007	0.000	0.000	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.257	0.356	0.000	0.014	0.000	0.148	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.208	0.366	0.000	0.038	0.000	0.146	0.000	0.000	0.000	0.000	0.111	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Prev(%)	39.073	39.735	0.000	17.123	0.000	35.385	0.000	0.000	0.000	0.000	1.437	0.000	0.000	0.000	0.000	0.000	0.000	0.000

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.095	0.134	0.000	0.000	0.000	0.072	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.299	0.385	0.000	0.000	0.000	0.238	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.274	0.378	0.000	0.000	0.000	0.161	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Prev(%)	38.519	39.268	0.000	0.000	0.000	39.881	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.102	0.075	0.001	0.003	0.006	0.003	0.001	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.051	0.324	0.002	0.011	0.015	0.004	0.002	0.000	0.000	0.000
Stdev	0.621	0.177	0.005	0.007	0.021	0.011	0.002	0.002	0.000	0.000
Prev(%)	25.676	38.235	16.279	22.857	17.857	22.000	18.182	9.677	5.000	0.000

Human Microbiome Project Metaphlan (not published) (data from healthy subjects)

No Notes