HOMD ::species::Lachnospiraceae [G2] bacterium HMT-096

Species: Lachnospiraceae [G2] bacterium HMT-096 (HMT-096)

Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospiraceae [G2]; Lachnospiraceae [G2] bacterium HMT-096

LINKS: Ecology Home | HMT-096: Body Sites Data | HMT-096: Taxon Description | Life Page: Lachnospiraceae [G2] bacterium HMT-096

Oral:	SUBP-- Subgingival Plaque	SUPP -- Supragingival Plaque	PERIO -- Periodontal	AKE -- Attached Keratinized Gingiva	BMU -- Buccal Mucosa
Oral:	HPA -- Hard Palate	SAL -- Saliva	THR -- Throat	PTO -- Palatine Tonsils	TDO -- Tongue Dorsum
Nasal:	ANA -- Anterior Nares
Skin:	LRC -- L_Retroauricular Crease	RRC -- R_Retroauricular Crease	LAF -- L_Antecubital Fossa	RAF -- R_Antecubital Fossa
Vaginal:	VIN -- Vaginal Introitus	MVA -- Mid Vagina	PFO -- Posterior Fornix
Gut:	STO -- Stool

Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

HMP 16S RefSeq (V1-V3) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.000	0.000	0.009	0.048	0.244	0.052	0.949	0.724	0.659	0.000	0.000	0.000	0.000	0.008	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.018	0.096	0.779	0.139	3.562	2.735	2.340	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.000	0.000	0.041	0.174	0.567	0.150	1.723	1.432	1.364	0.000	0.000	0.000	0.000	0.045	0.000	0.000	0.000	0.000
Prev(%)	0.000	0.000	12.587	35.616	53.020	32.308	64.881	62.667	56.129	0.000	0.000	0.000	0.000	6.912	0.000	0.000	0.000	0.000

HMP 16S RefSeq (V3-V5) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.000	0.038	0.000	0.178	0.594	0.190	1.693	1.389	1.138	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.015	0.000	0.361	1.818	0.602	5.769	4.745	3.465	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.000	0.328	0.000	0.707	1.226	0.408	2.916	2.772	2.463	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Prev(%)	0.000	13.171	0.000	38.958	54.220	51.190	63.863	63.747	63.747	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.004	0.022	0.111	0.018	0.042	0.101	0.419	0.402	0.402	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.002	0.013	0.198	0.059	0.123	0.286	1.040	1.463	1.361	0.000
Stdev	0.023	0.097	0.343	0.032	0.076	0.268	0.941	0.793	0.850	0.000
Prev(%)	14.865	32.353	46.512	65.714	57.143	58.000	78.788	77.419	60.000	0.000

HMP Metaphlan (not published)

No Notes

Eren V1-V3 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.001	0.006	0.002	0.024	0.133	0.044	0.780	0.592	0.503	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.069	0.397	0.160	2.634	1.470	1.933	0.000
Stdev	0.006	0.043	0.006	0.048	0.303	0.097	1.573	1.325	1.284	0.000
Prev(%)	5.195	3.896	6.494	36.364	48.052	28.571	59.740	57.143	50.649	0.000

Eren V3-V5 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.046	0.046	0.007	0.112	0.374	0.171	1.350	0.990	0.856	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.021	0.205	1.171	0.522	4.315	4.118	2.872	0.000
Stdev	0.372	0.488	0.028	0.431	0.887	0.358	2.363	1.911	1.951	0.000
Prev(%)	4.730	9.459	11.486	39.189	52.703	45.946	62.838	62.838	61.486	0.000

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