Species: Hoylesella sp. HMT-317 (HMT-317)
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 1.154 | 0.726 | 0.107 | 0.000 | 0.023 | 0.000 | 0.128 | 0.248 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 3.144 | 1.807 | 0.255 | 0.000 | 0.063 | 0.000 | 0.074 | 0.131 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 1.366 | 1.562 | 0.400 | 0.000 | 0.072 | 0.000 | 1.368 | 1.668 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 84.768 | 77.483 | 41.259 | 0.000 | 36.242 | 0.000 | 31.845 | 48.667 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
HMP 16S RefSeq (V3-V5) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.916 | 0.591 | 0.000 | 0.110 | 0.000 | 0.000 | 0.000 | 0.144 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.087 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 2.576 | 1.932 | 0.000 | 0.340 | 0.000 | 0.000 | 0.000 | 0.066 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.078 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 1.482 | 1.265 | 0.000 | 0.262 | 0.000 | 0.000 | 0.000 | 1.249 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.621 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 70.864 | 59.512 | 0.000 | 47.146 | 0.000 | 0.000 | 0.000 | 27.981 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 16.000 | 0.000 | 0.000 | 0.000 | 0.000 |
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.367 | 0.313 | 0.151 | 0.244 | 0.026 | 0.013 | 0.014 | 0.016 | 0.002 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 1.039 | 0.474 | 0.271 | 0.379 | 0.062 | 0.041 | 0.027 | 0.060 | 0.008 | 0.000 |
| Stdev | 0.833 | 0.837 | 0.540 | 0.769 | 0.055 | 0.018 | 0.040 | 0.031 | 0.004 | 0.000 |
| Prev(%) | 70.270 | 76.471 | 44.186 | 60.000 | 57.143 | 58.000 | 42.424 | 51.613 | 22.500 | 0.000 |
HMP Metaphlan (not published)
No Notes
Eren V1-V3 www.pnas.org
** View Notes (mouse over) **
Notes:
reads equally close to P. sp. HMT 317 and P. sp. HMT 472 were assigned half to each taxon
reads equally close to P. sp. HMT 317 and P. sp. HMT 472 were assigned half to each taxon
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.036 | 0.060 | 0.000 | 0.005 | 0.001 | 0.003 | 0.002 | 0.004 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.171 | 0.051 | 0.000 | 0.002 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.096 | 0.284 | 0.001 | 0.019 | 0.004 | 0.013 | 0.010 | 0.027 | 0.002 | 0.000 |
| Prev(%) | 22.078 | 18.182 | 2.597 | 10.390 | 3.896 | 7.792 | 7.792 | 3.896 | 2.597 | 0.000 |
Eren V3-V5 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.875 | 0.638 | 0.007 | 0.060 | 0.017 | 0.097 | 0.019 | 0.031 | 0.008 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 2.594 | 1.590 | 0.000 | 0.152 | 0.064 | 0.272 | 0.035 | 0.064 | 0.025 | 0.000 |
| Stdev | 1.730 | 1.444 | 0.037 | 0.136 | 0.045 | 0.223 | 0.098 | 0.126 | 0.031 | 0.000 |
| Prev(%) | 66.216 | 58.784 | 5.405 | 46.622 | 25.000 | 50.000 | 18.919 | 27.703 | 14.865 | 0.000 |
