HOMD ::Species:Hoylesella shahii

Species: Hoylesella shahii (HMT-795)

Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Hoylesella; Hoylesella shahii Each rank name is a link to abundance plots at that rank:

LINKS: Ecology Home | HMT-795: Body Sites Data | HMT-795: Taxon Description | Life Page: Hoylesella shahii

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Eren V1-V3 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.039	0.034	0.004	0.020	0.075	0.102	0.211	0.170	0.153	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.039	0.036	0.006	0.085	0.237	0.349	0.521	0.530	0.451	0.000
Stdev	0.157	0.141	0.014	0.052	0.187	0.194	0.612	0.377	0.380	0.000
Prev(%)	16.883	15.584	10.390	23.377	38.961	40.260	40.260	44.156	35.065	0.000

Eren V3-V5 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.007	0.003	0.008	0.062	0.203	0.299	0.363	0.347	0.233	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.021	0.205	0.708	0.899	1.248	1.015	0.855	0.000
Stdev	0.069	0.025	0.030	0.148	0.425	0.602	0.726	0.822	0.536	0.003
Prev(%)	4.730	4.054	11.486	32.432	42.568	47.973	43.243	41.216	40.541	0.699

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.000	0.000	0.000	0.050	0.144	0.166	0.339	0.330	0.193	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.096	0.440	0.626	1.240	0.866	0.759	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.000	0.000	0.000	0.198	0.373	0.408	0.708	0.771	0.457	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Prev(%)	0.000	0.000	0.000	39.041	34.899	50.000	48.214	47.333	39.355	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.000	0.000	0.000	0.064	0.242	0.310	0.386	0.348	0.210	0.000	0.000	0.000	0.106	0.045	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.163	0.825	0.891	1.318	1.135	0.745	0.000	0.000	0.000	0.125	0.000	0.000	0.000	0.000	0.000
Stdev	0.000	0.000	0.000	0.214	0.464	0.527	0.815	0.668	0.459	0.000	0.000	0.000	0.421	0.251	0.000	0.000	0.000	0.000
Prev(%)	0.000	0.000	0.000	27.047	51.918	72.321	47.352	49.392	50.122	0.000	0.000	0.000	15.862	6.000	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.001	0.001	0.042	0.032	0.055	0.153	0.167	0.209	0.142	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.003	0.001	0.117	0.082	0.091	0.614	0.588	0.499	0.326	0.000
Stdev	0.003	0.003	0.101	0.077	0.195	0.310	0.294	0.514	0.523	0.000
Prev(%)	14.865	11.765	41.860	51.429	42.857	54.000	60.606	51.613	50.000	0.000

Human Microbiome Project Metaphlan (not published) (data from healthy subjects)

No Notes

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