HOMD ::Species:Hoylesella nanceiensis

Species: Hoylesella nanceiensis (HMT-299)

Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Hoylesella; Hoylesella nanceiensis Each rank name is a link to abundance plots at that rank:

LINKS: Ecology Home | HMT-299: Body Sites Data | HMT-299: Taxon Description | Life Page: Hoylesella nanceiensis

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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HMP 16S RefSeq (V1-V3) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.000	0.000	0.359	0.196	0.547	0.915	0.455	0.517	0.661	0.019	0.012	0.000	0.024	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	1.244	0.550	1.289	2.323	1.124	1.399	1.636	0.027	0.009	0.000	0.052	0.000	0.000	0.000	0.000	0.000
Stdev	0.000	0.000	0.768	0.317	0.758	1.186	0.677	0.741	0.958	0.113	0.071	0.000	0.098	0.000	0.000	0.000	0.000	0.000
Prev(%)	0.000	0.000	66.434	76.712	86.577	86.923	84.226	87.333	88.387	14.333	11.782	0.000	15.517	0.000	0.000	0.000	0.000	0.000

HMP 16S RefSeq (V3-V5) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.033	0.000	0.649	0.464	1.176	1.587	0.740	0.764	1.157	0.000	0.090	0.069	0.194	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.076	0.000	0.019	0.031	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.095	0.000	2.091	1.211	2.731	3.710	1.889	1.772	2.690	0.000	0.018	0.009	0.241	0.000	0.000	0.000	0.000	0.000
Stdev	0.083	0.000	1.258	0.699	1.594	2.127	1.006	1.162	1.653	0.000	0.507	0.496	0.862	0.000	0.000	0.000	0.000	0.000
Prev(%)	38.765	0.000	65.679	80.893	89.770	92.560	83.801	91.727	93.187	0.000	12.739	11.111	22.069	0.000	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.005	0.011	0.074	0.135	0.188	0.929	0.306	0.261	0.269	0.000
10^thp	0.000	0.000	0.000	0.000	0.008	0.006	0.008	0.000	0.005	0.000
90^thp	0.011	0.016	0.159	0.379	0.345	3.146	0.551	0.693	0.586	0.000
Stdev	0.013	0.039	0.163	0.246	0.281	1.608	0.674	0.597	0.642	0.000
Prev(%)	39.189	41.176	81.395	82.857	92.857	92.000	93.939	87.097	95.000	0.000

HMP Metaphlan (not published)

No Notes

Eren V1-V3 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.012	0.013	0.419	0.192	0.494	0.989	0.384	0.420	0.756	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.004	0.000
90^thp	0.040	0.048	1.167	0.522	1.185	2.379	0.984	1.051	1.716	0.000
Stdev	0.024	0.028	0.991	0.324	0.525	1.244	0.490	0.526	1.074	0.002
Prev(%)	31.169	25.974	48.052	80.519	88.312	88.312	83.117	87.013	89.610	1.299

Eren V3-V5 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.032	0.028	0.346	0.294	0.766	1.657	0.557	0.610	1.236	0.000
10^thp	0.000	0.000	0.000	0.000	0.042	0.098	0.000	0.000	0.011	0.000
90^thp	0.079	0.084	0.857	0.691	1.826	3.961	1.320	1.463	2.985	0.000
Stdev	0.095	0.079	0.820	0.513	1.048	2.495	0.696	0.821	1.916	0.002
Prev(%)	29.054	31.081	61.486	86.486	91.892	94.595	83.108	89.189	89.865	1.399

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