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Taxonomy: V4.0   |  16S rRNA RefSeq: V16.02   |  Genomic RefSeq: V11.01
Species: Haemophilus sputorum (HMT-944)
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Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus sputorum
Oral:
SUBP-- Subgingival Plaque SUPP -- Supragingival Plaque PERIO -- Periodontal AKE -- Attached Keratinized Gingiva BMU -- Buccal Mucosa
HPA -- Hard Palate SAL -- Saliva THR -- Throat PTO -- Palatine Tonsils TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease RRC -- R_Retroauricular Crease LAF -- L_Antecubital Fossa RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus MVA -- Mid Vagina PFO -- Posterior Fornix
Gut:
STO -- Stool
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0000.0000.0280.0740.0250.0000.0460.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0310.0700.0450.0000.0780.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0000.0000.1560.3810.0800.0000.1710.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)0.0000.00023.07735.61626.1740.00034.8210.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000

HMP 16S RefSeq (V3-V5) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0000.0000.1800.6370.2780.3440.2920.3140.0580.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.3791.7480.8520.9860.5730.8510.1640.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0000.0000.6381.1600.4790.5800.9510.7330.1400.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)0.0000.00044.69173.20162.66071.13156.07569.10048.4180.0000.0000.0000.0000.0000.0000.0000.0000.000

Dewhirst (35x9) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.0090.0120.1710.2900.0640.1160.0530.1480.0610.000
10thp0.0000.0000.0040.0040.0000.0000.0000.0000.0000.000
90thp0.0100.0100.6430.8590.1480.1370.1990.6490.1210.000
Stdev0.0400.0540.3070.6490.0900.3200.0750.3110.1910.000
Prev(%)41.89250.00093.02391.42978.57172.00072.72774.19457.5000.000

HMP Metaphlan (not published)
No Notes
SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.0050.0090.0000.0210.2340.0500.5320.0470.1310.0330.0010.0010.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0500.0210.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0100.0000.0660.7100.0501.1100.0650.3460.0850.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0270.0740.0000.0510.4880.0000.5090.1520.3280.0920.0060.0060.0000.0000.0000.0000.0000.003
Prev(%)4.16710.3540.00023.52958.245100.00087.50025.00044.00044.1311.3514.1670.0000.0000.0000.0000.0000.909

Eren V1-V3 www.pnas.org
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.0010.0030.0160.0540.0180.0400.0180.0220.0100.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0180.0640.0310.0610.0530.0470.0310.000
Stdev0.0080.0140.1060.2710.0620.1650.0580.0660.0280.000
Prev(%)2.5976.49412.98729.87019.48116.88320.77924.67515.5840.000

Eren V3-V5 www.pnas.org
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.0050.0050.0360.1660.0720.1440.1010.1700.0240.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0200.0250.0860.5310.1950.3800.2180.3660.0680.000
Stdev0.0160.0150.0980.2770.1300.2540.2220.5060.0650.003
Prev(%)14.18912.16235.13568.24355.40566.89249.32462.16233.1081.399