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Taxonomy: V4.0   |  16S rRNA RefSeq: V16.02   |  Genomic RefSeq: V11.01
Species: Haemophilus pittmaniae (HMT-946)
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Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus pittmaniae
Oral:
SUBP-- Subgingival Plaque SUPP -- Supragingival Plaque PERIO -- Periodontal AKE -- Attached Keratinized Gingiva BMU -- Buccal Mucosa
HPA -- Hard Palate SAL -- Saliva THR -- Throat PTO -- Palatine Tonsils TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease RRC -- R_Retroauricular Crease LAF -- L_Antecubital Fossa RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus MVA -- Mid Vagina PFO -- Posterior Fornix
Gut:
STO -- Stool
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes

HMP 16S RefSeq (V3-V5) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0330.0690.5220.2730.0640.1000.0000.1070.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0890.1941.3320.7520.1270.1910.0000.2140.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0750.1381.0750.4960.2820.3850.0000.4060.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)40.74152.68374.56866.25331.20244.9400.00040.1460.0000.0000.0000.0000.0000.0000.0000.0000.0000.000

Dewhirst (35x9) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.0110.0220.0840.1300.0400.0390.0270.0750.0230.000
10thp0.0000.0000.0000.0030.0000.0000.0000.0000.0000.000
90thp0.0300.0630.2110.2290.0940.1180.0670.1160.0510.000
Stdev0.0220.0410.1380.3050.0510.0660.0670.2800.0500.000
Prev(%)51.35152.94181.39591.42985.71476.00051.51558.06555.0000.000

HMP Metaphlan (not published)
No Notes
SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.0000.0000.0000.0000.0110.0200.0140.0360.2690.0180.0000.0000.0000.0000.0000.0000.0000.001
10thp0.0000.0000.0000.0000.0000.0200.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.0000.0000.0200.0530.0500.1560.0200.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0000.0020.0000.0000.0780.0000.0260.1200.9980.1170.0030.0000.0000.0000.0000.0000.0000.015
Prev(%)0.0000.2530.0000.0007.181100.00025.00018.75020.00015.2580.4500.0000.0000.0000.0000.0000.0000.727

Eren V1-V3 www.pnas.org
No Notes

Eren V3-V5 www.pnas.org
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.0020.0010.0430.0110.0300.0940.0260.0460.0240.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.0000.0370.1100.0390.0420.0290.000
Stdev0.0160.0040.3610.0610.1730.5700.1110.2040.1710.003
Prev(%)2.7031.3516.0819.45913.51422.29714.18915.54112.1620.699