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Taxonomy: V4.2   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.02   |  Viruses: V1.2

Species: Eikenella sp. HMT-011 (HMT-011)

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Full Lineage: Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales; Neisseriaceae; Eikenella; Eikenella sp. HMT-011
Each rank name is a link to abundance plots at that rank:
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Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Eren V1-V3 www.pnas.org (data from healthy subjects)
No Notes

Eren V3-V5 www.pnas.org (data from healthy subjects)
Notes:
Reads equally close to K. denitrificans, K. sp. HMT 932, and Eikenella sp. HMT 011 were assigned one-third to each taxon.




SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)0.0640.0910.0010.0120.0050.0140.0030.0030.0020.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.1390.2430.0010.0250.0160.0450.0090.0060.0030.000
Stdev0.1620.1730.0050.0470.0130.0360.0090.0160.0060.000
Prev(%)58.78467.56810.13528.37823.64932.43216.21614.86510.8110.000
Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)
No Notes

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)
No Notes

Dewhirst (35x9) (not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.0020.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0060.0010.0010.0010.0000.0000.0000.0000.0000.000
Prev(%)9.4595.8822.3262.8570.0004.0000.0000.0000.0000.000
Human Microbiome Project Metaphlan (not published) (data from healthy subjects)
No Notes