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Taxonomy: V4.0   |  16S rRNA RefSeq: V16.01   |  Genomic RefSeq: V11.01
Species: Corynebacterium mucifaciens (HMT-835)
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Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium mucifaciens
Oral:
SUBP-- Subgingival Plaque SUPP -- Supragingival Plaque PERIO -- Periodontal AKE -- Attached Keratinized Gingiva BMU -- Buccal Mucosa
HPA -- Hard Palate SAL -- Saliva THR -- Throat PTO -- Palatine Tonsils TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease RRC -- R_Retroauricular Crease LAF -- L_Antecubital Fossa RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus MVA -- Mid Vagina PFO -- Posterior Fornix
Gut:
STO -- Stool
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0090.0370.0150.6260.3220.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0230.0130.6380.6810.0000.0000.0000.000
Stdev0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0650.3550.0873.8491.0110.0000.0000.0000.000
Prev(%)0.0000.0000.0000.0000.0000.0000.0000.0000.0009.33317.52913.31446.55243.7790.0000.0000.0000.000

HMP 16S RefSeq (V3-V5) (not published)
** View Notes (mouse over) **
Notes:
Neither HMT-030 nor HMT-835 were present singularly so these reads were split evenly at these sites (LRC,RRC,SUBP).

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0210.0000.0000.0000.0000.0000.0000.0000.0000.0000.0300.1600.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0440.0630.0000.0000.0000.0000.0000.000
Stdev0.3840.0000.0000.0000.0000.0000.0000.0000.0000.0000.1532.1500.0000.0000.0000.0000.0000.000
Prev(%)0.9880.0000.0000.0000.0000.0000.0000.0000.0000.00032.80330.2470.0000.0000.0000.0000.0000.000

Dewhirst (35x9) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
Prev(%)1.3510.0002.3262.8570.0000.0000.0000.0000.0000.000

HMP Metaphlan (not published)
No Notes

Eren V1-V3 www.pnas.org
No Notes

Eren V3-V5 www.pnas.org
No Notes