Species: Alloprevotella sp. HMT-914 (HMT-914)
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.000 | 0.000 | 0.041 | 0.086 | 0.169 | 0.122 | 0.178 | 0.182 | 0.200 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.000 | 0.000 | 0.063 | 0.112 | 0.317 | 0.298 | 0.418 | 0.605 | 0.688 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.000 | 0.000 | 0.215 | 0.310 | 0.492 | 0.415 | 0.491 | 0.490 | 0.561 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 0.000 | 0.000 | 25.175 | 41.781 | 46.309 | 39.231 | 48.810 | 46.667 | 45.806 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
HMP 16S RefSeq (V3-V5) (not published)
** View Notes (mouse over) **
Notes:
Reads equidistant to HMT-308 and HMT-914 were assigned to each taxon in proportion to the abundance of HMT-308 and HMT-914 individually at this body site (SAL).
Reads equidistant to HMT-308 and HMT-914 were assigned to each taxon in proportion to the abundance of HMT-308 and HMT-914 individually at this body site (SAL).
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.000 | 0.000 | 0.358 | 0.596 | 1.273 | 0.936 | 0.493 | 0.748 | 0.936 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.060 | 0.071 | 0.000 | 0.027 | 0.038 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.000 | 0.000 | 0.915 | 1.413 | 2.770 | 2.308 | 1.400 | 1.758 | 2.398 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.000 | 0.000 | 0.988 | 0.988 | 1.371 | 1.094 | 1.066 | 1.204 | 1.468 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 0.000 | 0.000 | 55.556 | 84.615 | 92.583 | 94.345 | 71.963 | 92.944 | 93.187 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.002 | 0.002 | 0.012 | 0.025 | 0.040 | 0.072 | 0.076 | 0.159 | 0.045 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.003 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.002 | 0.003 | 0.031 | 0.048 | 0.070 | 0.239 | 0.273 | 0.132 | 0.084 | 0.000 |
| Stdev | 0.008 | 0.010 | 0.036 | 0.079 | 0.099 | 0.172 | 0.130 | 0.551 | 0.099 | 0.000 |
| Prev(%) | 13.514 | 11.765 | 41.860 | 51.429 | 75.000 | 66.000 | 90.909 | 83.871 | 77.500 | 0.000 |
HMP Metaphlan (not published)
No Notes
Eren V1-V3 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.040 | 0.020 | 0.113 | 0.024 | 0.004 | 0.012 | 0.002 | 0.007 | 0.001 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.051 | 0.040 | 0.000 | 0.000 | 0.004 | 0.033 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.143 | 0.062 | 0.684 | 0.143 | 0.013 | 0.044 | 0.009 | 0.032 | 0.004 | 0.000 |
| Prev(%) | 14.286 | 12.987 | 7.792 | 9.091 | 10.390 | 15.584 | 3.896 | 9.091 | 3.896 | 0.000 |
Eren V3-V5 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.057 | 0.040 | 0.077 | 0.173 | 0.481 | 0.735 | 0.935 | 0.599 | 0.729 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.043 | 0.017 | 0.022 | 0.000 | 0.000 |
| 90thp | 0.120 | 0.137 | 0.125 | 0.416 | 1.294 | 1.711 | 2.112 | 1.426 | 1.873 | 0.000 |
| Stdev | 0.197 | 0.082 | 0.340 | 0.324 | 0.633 | 0.939 | 1.237 | 0.832 | 0.914 | 0.001 |
| Prev(%) | 41.216 | 42.568 | 36.486 | 76.351 | 88.514 | 93.243 | 90.541 | 91.892 | 86.486 | 0.699 |
