HOMD ::Species:Alloprevotella sp. HMT-473

Species: Alloprevotella sp. HMT-473 (HMT-473)

Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Alloprevotella; Alloprevotella sp. HMT-473 Each rank name is a link to abundance plots at that rank:

LINKS: Ecology Home | HMT-473: Body Sites Data | HMT-473: Taxon Description | Life Page: Alloprevotella sp. HMT-473

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Eren V1-V3 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.028	0.032	3.702	0.350	0.168	0.218	0.194	0.170	0.113	0.001
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.073	0.038	12.584	0.409	0.462	0.635	0.544	0.402	0.358	0.000
Stdev	0.101	0.168	6.403	1.236	0.354	0.410	0.392	0.386	0.263	0.009
Prev(%)	24.675	15.584	59.740	48.052	51.948	54.545	54.545	55.844	41.558	2.597

Eren V3-V5 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.434	0.341	7.779	0.707	0.404	1.044	0.603	0.839	0.254	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.350	1.132	24.541	1.264	1.353	2.877	1.671	2.147	0.678	0.000
Stdev	0.881	0.668	11.082	2.748	0.697	1.802	1.252	2.467	0.630	0.004
Prev(%)	58.108	59.459	73.649	73.649	67.568	79.730	64.865	70.946	53.378	2.098

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.308	0.203	5.440	0.430	0.347	0.723	0.468	0.641	0.217	0.078	0.024	0.016	0.073	0.141	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.505	0.618	21.188	0.817	0.968	1.791	1.190	1.396	0.559	0.100	0.033	0.023	0.163	0.321	0.000	0.000	0.000	0.000
Stdev	0.993	0.584	8.594	1.436	0.698	1.426	1.138	2.032	0.831	0.500	0.134	0.078	0.335	0.525	0.000	0.000	0.000	0.000
Prev(%)	58.940	57.616	65.734	60.959	68.456	72.308	64.286	72.667	50.323	23.667	17.241	17.847	21.264	22.120	0.000	0.000	0.000	0.000

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.428	0.306	10.382	1.414	0.697	1.126	0.730	0.881	0.304	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.043	0.887	32.848	2.941	2.022	3.285	1.865	2.281	0.921	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	1.241	0.767	14.782	4.422	1.452	1.835	2.063	2.216	0.806	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Prev(%)	58.272	59.756	70.123	67.742	64.962	77.083	65.421	71.290	53.285	0.000	0.318	0.000	0.000	0.000	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.039	0.007	0.773	0.051	0.112	0.112	0.284	0.481	0.052	0.000
10^thp	0.000	0.000	0.000	0.000	0.001	0.000	0.000	0.000	0.000	0.000
90^thp	0.014	0.019	2.234	0.127	0.344	0.291	0.765	0.893	0.139	0.000
Stdev	0.189	0.022	1.836	0.096	0.188	0.262	0.602	1.272	0.110	0.000
Prev(%)	33.784	35.294	76.744	82.857	89.286	66.000	78.788	87.097	67.500	0.000

Human Microbiome Project Metaphlan (not published) (data from healthy subjects)

No Notes

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