HOMD Banner
Taxonomy: V4.1   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.02   |  Viruses: V1.2

Species: Absconditicoccaceae [G1] bacterium HMT-345 (HMT-345)

Download Options
Full Lineage: Bacteria; Patescibacteria; Patescibacteria [C1]; Absconditabacterales; Absconditicoccaceae; Absconditicoccaceae [G1]; Absconditicoccaceae [G1] bacterium HMT-345
Each rank name is a link to abundance plots at that rank:
Hide Legend
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.0170.0000.0000.0090.0280.3150.1050.2060.0780.0000.0000.0000.0000.0100.0000.0000.0000.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0600.0000.0000.0190.0351.0560.1430.2220.0700.0000.0000.0000.0000.0000.0000.0000.0000.000
Stdev0.0460.0000.0000.0350.1210.9080.4150.8440.5280.0000.0000.0000.0000.1060.0000.0000.0000.000
Prev(%)25.8280.0000.00018.49318.12145.38527.67940.00025.1610.0000.0000.0000.0004.1470.0000.0000.0000.000
HMP 16S RefSeq (V3-V5) (not published)
No Notes

Dewhirst (35x9) (not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0.0100.0180.0510.0080.0050.0490.1630.2970.0220.000
10thp0.0000.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp0.0270.0430.2350.0230.0120.2070.1790.5990.0230.000
Stdev0.0350.0480.1400.0160.0110.1150.4880.8310.0850.000
Prev(%)18.91938.23532.55840.00028.57138.00051.51545.16132.5000.000
HMP Metaphlan (not published)
No Notes

Eren V1-V3 www.pnas.org
No Notes

Eren V3-V5 www.pnas.org
No Notes