Phylum: Bacteroidota
Download OptionsLower rank member(s): [Class:Bacteroidia] [Class:Chitinophagia] [Class:Flavobacteriia] [Class:Sphingobacteriia]
Genera:
LINKS: Ecology Home
| Life Page: Bacteroidota
Hide Legend
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 19.144 | 15.414 | 11.366 | 6.344 | 11.771 | 18.997 | 19.168 | 19.767 | 14.470 | 0.501 | 0.378 | 0.189 | 0.877 | 1.093 | 0.846 | 0.779 | 0.591 | 0.022 |
| 10thp | 6.181 | 4.735 | 1.047 | 0.884 | 3.693 | 9.512 | 8.024 | 8.697 | 6.301 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 29.832 | 26.818 | 28.590 | 13.052 | 19.472 | 31.548 | 29.882 | 30.991 | 22.692 | 1.216 | 0.590 | 0.324 | 2.074 | 3.058 | 1.142 | 0.699 | 0.163 | 0.000 |
| Stdev | 9.372 | 9.054 | 10.948 | 5.308 | 6.194 | 8.285 | 8.454 | 8.455 | 6.205 | 1.224 | 1.534 | 1.035 | 1.836 | 2.385 | 3.173 | 3.850 | 3.459 | 0.271 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 99.315 | 100.000 | 99.231 | 99.702 | 100.000 | 100.000 | 78.667 | 66.092 | 56.091 | 72.414 | 71.889 | 59.155 | 44.595 | 34.211 | 0.654 |
HMP 16S RefSeq (V3-V5) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 21.413 | 16.328 | 20.810 | 12.121 | 13.153 | 21.447 | 16.477 | 21.092 | 12.148 | 0.260 | 1.072 | 0.706 | 2.393 | 1.664 | 1.045 | 0.380 | 0.586 | 0.000 |
| 10thp | 7.896 | 5.024 | 1.594 | 2.310 | 4.417 | 10.676 | 6.158 | 8.785 | 3.817 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 33.448 | 27.023 | 48.945 | 24.941 | 23.604 | 34.108 | 29.023 | 34.352 | 22.827 | 0.452 | 1.517 | 0.855 | 4.298 | 4.264 | 1.630 | 0.316 | 0.182 | 0.000 |
| Stdev | 9.864 | 8.135 | 18.230 | 9.741 | 7.724 | 9.075 | 9.106 | 10.294 | 7.792 | 0.903 | 3.780 | 2.658 | 6.716 | 3.995 | 3.458 | 2.300 | 3.921 | 0.000 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 100.000 | 99.744 | 100.000 | 100.000 | 100.000 | 100.000 | 54.023 | 57.643 | 52.160 | 73.793 | 70.667 | 64.368 | 35.519 | 25.654 | 0.000 |
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 16.774 | 14.197 | 5.963 | 6.275 | 13.655 | 19.559 | 20.712 | 21.526 | 16.637 | 0.057 |
| 10thp | 2.365 | 3.904 | 0.155 | 0.177 | 2.041 | 2.579 | 9.346 | 7.931 | 0.474 | 0.000 |
| 90thp | 30.041 | 26.665 | 14.305 | 17.624 | 27.003 | 43.986 | 30.931 | 38.269 | 30.836 | 0.172 |
| Stdev | 10.439 | 9.048 | 7.242 | 6.493 | 11.194 | 16.097 | 9.136 | 12.042 | 11.017 | 0.109 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 40.000 |
HMP Metaphlan (not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 16.365 | 12.693 | 20.415 | 5.158 | 5.561 | 12.010 | 24.445 | 23.303 | 29.023 | 16.162 | 2.794 | 0.093 | 0.124 | 5.830 | 1.064 | 1.720 | 2.744 | 62.408 |
| 10thp | 6.855 | 2.915 | 6.694 | 0.262 | 0.510 | 12.010 | 15.161 | 9.650 | 16.770 | 7.420 | 0.000 | 0.000 | 0.000 | 5.830 | 0.000 | 0.000 | 0.000 | 29.833 |
| 90thp | 24.664 | 24.405 | 33.095 | 7.002 | 14.080 | 12.010 | 35.864 | 33.785 | 46.738 | 25.450 | 6.061 | 0.380 | 0.377 | 5.830 | 2.110 | 8.257 | 6.679 | 88.780 |
| Stdev | 6.967 | 7.821 | 10.053 | 9.420 | 5.685 | 0.000 | 9.366 | 11.048 | 12.454 | 7.213 | 9.669 | 0.179 | 0.277 | 0.000 | 2.698 | 4.282 | 9.457 | 21.974 |
| Prev(%) | 100.000 | 99.747 | 100.000 | 94.118 | 99.202 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 45.495 | 50.000 | 46.875 | 100.000 | 63.636 | 35.714 | 46.465 | 100.000 |
Eren V1-V3 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 19.213 | 15.677 | 10.071 | 7.367 | 10.718 | 17.622 | 15.084 | 16.657 | 14.301 | 0.012 |
| 10thp | 3.988 | 3.700 | 0.741 | 1.337 | 3.961 | 9.783 | 7.012 | 7.034 | 5.683 | 0.000 |
| 90thp | 31.283 | 26.853 | 25.206 | 16.836 | 18.504 | 25.481 | 23.535 | 27.684 | 25.046 | 0.047 |
| Stdev | 10.393 | 8.755 | 11.033 | 5.566 | 5.994 | 6.590 | 7.103 | 8.351 | 7.550 | 0.023 |
| Prev(%) | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 31.169 |
Eren V3-V5 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 25.119 | 18.673 | 13.535 | 9.247 | 14.494 | 26.431 | 21.727 | 22.016 | 18.745 | 0.005 |
| 10thp | 10.244 | 6.325 | 0.370 | 1.879 | 5.195 | 14.772 | 9.440 | 8.957 | 7.910 | 0.000 |
| 90thp | 37.407 | 28.956 | 33.506 | 19.939 | 25.738 | 37.783 | 35.519 | 36.646 | 29.301 | 0.016 |
| Stdev | 10.872 | 8.354 | 13.634 | 7.545 | 8.023 | 9.318 | 10.329 | 11.092 | 8.453 | 0.014 |
| Prev(%) | 100.000 | 100.000 | 99.324 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 15.385 |
