HOMD ::order::Lactobacillales

Order: Lactobacillales

Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Bacillota; Bacilli; Lactobacillales
Lower rank member(s): [Family:Aerococcaceae] [Family:Carnobacteriaceae] [Family:Enterococcaceae] [Family:Lactobacillaceae] [Family:Streptococcaceae]
Genera:

LINKS: Ecology Home | Life Page: Lactobacillales

Oral:	SUBP-- Subgingival Plaque	SUPP -- Supragingival Plaque	PERIO -- Periodontal	AKE -- Attached Keratinized Gingiva	BMU -- Buccal Mucosa
Oral:	HPA -- Hard Palate	SAL -- Saliva	THR -- Throat	PTO -- Palatine Tonsils	TDO -- Tongue Dorsum
Nasal:	ANA -- Anterior Nares
Skin:	LRC -- L_Retroauricular Crease	RRC -- R_Retroauricular Crease	LAF -- L_Antecubital Fossa	RAF -- R_Antecubital Fossa
Vaginal:	VIN -- Vaginal Introitus	MVA -- Mid Vagina	PFO -- Posterior Fornix
Gut:	STO -- Stool

Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

HMP 16S RefSeq (V1-V3) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	14.803	17.016	54.796	54.523	47.463	16.739	24.468	22.638	21.454	7.490	1.407	1.381	8.321	7.681	82.883	88.365	91.317	21.149
10^thp	5.128	6.552	30.447	35.846	24.515	4.073	7.900	6.857	8.579	0.262	0.024	0.017	0.698	0.665	45.132	72.931	77.568	3.314
90^thp	27.978	28.490	77.612	75.297	71.061	29.714	47.187	45.117	39.099	20.706	4.202	2.945	18.311	18.117	98.988	99.367	99.917	43.690
Stdev	11.145	9.023	18.620	15.333	16.839	10.750	15.715	16.214	11.457	10.972	2.517	3.665	12.090	7.749	24.104	20.480	21.187	16.734
Prev(%)	100.000	100.000	100.000	100.000	100.000	99.231	100.000	100.000	100.000	99.000	94.253	92.068	97.701	98.157	100.000	100.000	100.000	100.000

HMP 16S RefSeq (V3-V5) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	5.861	8.835	8.917	8.244	7.574	3.094	2.908	2.870	3.986	4.309	1.843	1.690	3.313	4.134	80.914	86.937	87.659	1.496
10^thp	1.276	2.677	2.064	2.527	2.360	0.842	0.506	0.583	0.807	0.028	0.000	0.000	0.000	0.000	18.878	45.194	36.003	0.069
90^thp	12.750	17.475	17.960	15.054	14.801	5.842	6.141	5.690	8.477	13.226	3.052	2.757	8.493	8.597	99.536	99.913	99.979	3.652
Stdev	5.658	6.447	7.784	5.632	5.693	2.432	2.721	2.984	3.680	8.759	8.248	8.222	7.051	10.171	29.819	26.368	28.786	2.809
Prev(%)	100.000	100.000	99.753	100.000	99.744	100.000	99.688	100.000	99.513	92.720	77.389	73.457	88.966	89.333	99.425	99.454	98.953	95.864

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	21.590	32.338	60.494	59.163	51.552	46.158	41.410	40.436	44.095	1.034
10^thp	3.615	16.560	30.746	34.017	31.393	19.959	21.224	15.466	21.221	0.004
90^thp	47.628	54.452	89.937	84.963	77.771	76.565	64.042	64.516	75.877	3.129
Stdev	16.511	14.997	22.734	18.457	19.329	22.815	16.415	20.430	21.794	1.941
Prev(%)	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	90.000

HMP Metaphlan (not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	7.806	8.596	3.779	38.270	36.802	43.780	11.280	8.149	10.554	14.150	8.112	0.356	0.500	8.280	85.588	83.449	82.887	0.185
10^thp	1.638	2.340	0.193	13.714	17.410	43.780	5.692	2.595	3.246	4.740	0.000	0.000	0.000	8.280	76.050	27.148	15.005	0.000
90^thp	14.197	15.860	12.703	72.014	59.070	43.780	16.362	14.935	16.476	25.865	25.234	1.111	0.573	8.280	99.490	99.283	100.000	0.250
Stdev	5.957	7.191	5.069	23.166	16.343	0.000	5.357	5.580	13.443	9.411	14.705	0.801	1.830	0.000	28.535	33.724	32.062	1.503
Prev(%)	100.000	100.000	95.833	100.000	99.734	100.000	100.000	100.000	100.000	99.765	68.468	66.667	62.500	100.000	100.000	100.000	100.000	53.636

Eren V1-V3 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	16.989	19.616	63.721	62.532	55.072	19.369	31.652	32.957	28.524	0.074
10^thp	5.904	8.416	37.208	40.895	34.275	5.059	9.919	9.402	11.079	0.000
90^thp	31.783	34.734	85.607	83.345	78.437	34.088	55.888	60.978	49.219	0.224
Stdev	12.135	10.367	18.602	16.171	16.500	11.533	18.260	20.908	14.202	0.107
Prev(%)	100.000	100.000	100.000	100.000	100.000	98.701	100.000	100.000	100.000	63.636

Eren V3-V5 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	12.064	16.121	49.829	55.420	45.457	15.551	29.052	26.010	24.415	0.036
10^thp	2.640	5.492	25.032	32.400	24.466	6.105	8.028	7.767	7.919	0.000
90^thp	27.530	32.217	74.295	76.908	71.738	26.517	55.588	50.706	45.861	0.110
Stdev	9.427	10.727	18.637	16.587	17.211	8.447	17.868	16.923	14.859	0.068
Prev(%)	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	47.552

Copyright 2007-2025, The Forsyth Institute
Hosted on Amazon AWS EC2