Order: Lachnospirales
Download OptionsLower rank member(s): [Family:Lachnospiraceae]
Genera:
LINKS: Ecology Home
| Life Page: Lachnospirales
Hide Legend
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.669 | 0.396 | 0.185 | 0.578 | 2.034 | 3.791 | 4.359 | 3.858 | 4.040 | 0.028 | 0.097 | 0.016 | 0.165 | 0.222 | 0.998 | 1.238 | 0.990 | 0.000 |
| 10thp | 0.034 | 0.011 | 0.000 | 0.026 | 0.284 | 0.707 | 1.164 | 0.996 | 1.004 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 1.388 | 1.154 | 0.515 | 1.330 | 4.207 | 8.558 | 8.740 | 7.047 | 7.711 | 0.015 | 0.050 | 0.002 | 0.288 | 0.403 | 0.220 | 0.069 | 0.066 | 0.000 |
| Stdev | 0.725 | 0.558 | 0.363 | 0.794 | 1.859 | 4.016 | 2.995 | 2.533 | 2.851 | 0.237 | 1.298 | 0.130 | 0.561 | 0.751 | 5.442 | 7.699 | 7.131 | 0.000 |
| Prev(%) | 95.364 | 91.391 | 72.727 | 92.466 | 99.329 | 95.385 | 98.810 | 100.000 | 100.000 | 14.000 | 24.425 | 10.198 | 28.161 | 35.484 | 32.394 | 25.676 | 19.737 | 0.000 |
HMP 16S RefSeq (V3-V5) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 1.204 | 0.884 | 0.219 | 1.528 | 4.725 | 6.181 | 7.896 | 7.066 | 7.342 | 0.081 | 0.043 | 0.100 | 0.140 | 0.448 | 0.828 | 1.263 | 1.158 | 0.011 |
| 10thp | 0.146 | 0.037 | 0.000 | 0.148 | 1.207 | 2.005 | 1.823 | 2.002 | 1.876 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 2.441 | 2.339 | 0.498 | 3.472 | 8.994 | 11.218 | 15.042 | 13.932 | 14.176 | 0.057 | 0.037 | 0.056 | 0.305 | 1.746 | 0.143 | 0.066 | 0.019 | 0.000 |
| Stdev | 1.014 | 1.075 | 0.568 | 1.772 | 3.449 | 4.717 | 5.557 | 5.272 | 5.111 | 0.629 | 0.202 | 0.652 | 0.496 | 1.095 | 5.187 | 7.884 | 7.963 | 0.132 |
| Prev(%) | 97.284 | 95.610 | 57.037 | 96.774 | 98.977 | 100.000 | 98.754 | 100.000 | 99.757 | 18.008 | 16.561 | 14.815 | 18.621 | 40.000 | 31.034 | 16.940 | 13.089 | 3.650 |
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.908 | 0.687 | 0.760 | 0.466 | 0.755 | 1.241 | 2.179 | 2.121 | 2.283 | 0.000 |
| 10thp | 0.029 | 0.037 | 0.004 | 0.004 | 0.045 | 0.034 | 0.272 | 0.196 | 0.012 | 0.000 |
| 90thp | 2.432 | 1.665 | 1.612 | 1.154 | 1.528 | 2.753 | 5.474 | 6.095 | 6.867 | 0.000 |
| Stdev | 1.162 | 0.801 | 1.673 | 0.652 | 1.031 | 1.220 | 2.365 | 2.510 | 3.248 | 0.000 |
| Prev(%) | 97.297 | 100.000 | 95.349 | 91.429 | 100.000 | 98.000 | 100.000 | 100.000 | 95.000 | 0.000 |
HMP Metaphlan (not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.510 | 0.405 | 0.712 | 0.131 | 0.384 | 0.700 | 2.199 | 2.080 | 2.397 | 3.228 | 0.058 | 0.001 | 0.000 | 0.000 | 0.002 | 0.113 | 0.014 | 0.274 |
| 10thp | 0.109 | 0.000 | 0.068 | 0.000 | 0.000 | 0.700 | 0.769 | 0.000 | 0.424 | 1.215 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 1.049 | 0.945 | 1.611 | 0.442 | 1.150 | 0.700 | 4.350 | 4.260 | 4.162 | 5.460 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.366 | 0.516 | 0.616 | 0.238 | 0.763 | 0.000 | 1.844 | 1.885 | 1.834 | 1.676 | 0.503 | 0.006 | 0.000 | 0.000 | 0.006 | 0.422 | 0.184 | 1.690 |
| Prev(%) | 100.000 | 85.101 | 100.000 | 58.824 | 70.479 | 100.000 | 100.000 | 81.250 | 92.000 | 99.531 | 1.351 | 4.167 | 0.000 | 0.000 | 9.091 | 7.143 | 1.515 | 6.182 |
Eren V1-V3 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.718 | 0.611 | 0.094 | 0.522 | 1.525 | 3.354 | 4.239 | 3.429 | 3.504 | 0.009 |
| 10thp | 0.025 | 0.000 | 0.000 | 0.035 | 0.303 | 1.111 | 0.846 | 0.845 | 0.751 | 0.000 |
| 90thp | 1.582 | 1.864 | 0.274 | 1.412 | 3.325 | 5.900 | 8.343 | 6.065 | 5.743 | 0.034 |
| Stdev | 0.663 | 0.838 | 0.192 | 0.527 | 1.169 | 2.855 | 2.952 | 2.410 | 2.284 | 0.021 |
| Prev(%) | 90.909 | 84.416 | 62.338 | 94.805 | 100.000 | 97.403 | 98.701 | 100.000 | 100.000 | 23.377 |
Eren V3-V5 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 1.072 | 0.961 | 0.183 | 0.907 | 2.511 | 4.528 | 5.368 | 4.490 | 4.641 | 0.000 |
| 10thp | 0.155 | 0.047 | 0.000 | 0.061 | 0.676 | 1.375 | 1.280 | 1.298 | 1.078 | 0.000 |
| 90thp | 1.991 | 2.122 | 0.493 | 2.092 | 4.909 | 7.989 | 10.909 | 9.750 | 10.005 | 0.000 |
| Stdev | 1.034 | 1.199 | 0.407 | 1.163 | 2.233 | 3.621 | 4.012 | 3.455 | 3.811 | 0.002 |
| Prev(%) | 97.973 | 95.270 | 66.216 | 97.973 | 99.324 | 100.000 | 99.324 | 100.000 | 100.000 | 2.098 |
