Class: Synergistia
Download OptionsLower rank member(s): [Order:Synergistales]
Genera:
LINKS: Ecology Home
| Life Page: Synergistia
Hide Legend
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.213 | 0.023 | 0.000 | 0.000 | 0.000 | 0.000 | 0.013 | 0.051 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.006 | 0.000 | 0.157 | 0.010 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.739 | 0.050 | 0.000 | 0.000 | 0.000 | 0.000 | 0.012 | 0.083 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.499 | 0.077 | 0.000 | 0.000 | 0.000 | 0.000 | 0.072 | 0.176 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.094 | 0.000 | 1.183 | 0.056 | 0.000 |
| Prev(%) | 47.682 | 17.881 | 0.000 | 0.000 | 0.000 | 0.000 | 11.310 | 33.333 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.461 | 0.000 | 9.459 | 3.947 | 0.000 |
HMP 16S RefSeq (V3-V5) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.287 | 0.033 | 0.000 | 0.000 | 0.000 | 0.000 | 0.020 | 0.056 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.070 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.943 | 0.055 | 0.000 | 0.000 | 0.000 | 0.000 | 0.038 | 0.149 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.678 | 0.150 | 0.000 | 0.000 | 0.000 | 0.000 | 0.086 | 0.156 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.870 | 0.000 | 0.000 |
| Prev(%) | 46.667 | 20.000 | 0.000 | 0.000 | 0.000 | 0.000 | 14.019 | 32.117 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 3.825 | 0.000 | 0.000 |
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.392 | 0.024 | 0.004 | 0.032 | 0.009 | 0.006 | 0.009 | 0.072 | 0.001 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.972 | 0.126 | 0.004 | 0.143 | 0.031 | 0.018 | 0.024 | 0.097 | 0.002 | 0.000 |
| Stdev | 1.200 | 0.048 | 0.013 | 0.078 | 0.021 | 0.012 | 0.023 | 0.277 | 0.003 | 0.000 |
| Prev(%) | 43.243 | 47.059 | 20.930 | 51.429 | 28.571 | 46.000 | 42.424 | 45.161 | 17.500 | 0.000 |
HMP Metaphlan (not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.060 | 0.008 | 0.625 | 0.000 | 0.002 | 0.000 | 0.013 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.001 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.222 | 0.020 | 2.002 | 0.000 | 0.000 | 0.000 | 0.030 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.112 | 0.034 | 0.855 | 0.000 | 0.029 | 0.000 | 0.035 | 0.000 | 0.000 | 0.007 | 0.001 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.006 |
| Prev(%) | 45.833 | 12.626 | 75.000 | 0.000 | 1.064 | 0.000 | 12.500 | 0.000 | 0.000 | 0.235 | 0.450 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 1.273 |
Eren V1-V3 www.pnas.org
No Notes
Eren V3-V5 www.pnas.org
No Notes
