HOMD ::Genus:Segatella

Genus: Segatella

Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Segatella Each rank name is a link to abundance plots at that rank:

Lower rank member(s): show[+]

LINKS: Ecology Home | Life Page: Segatella

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Eren V1-V3 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	1.195	0.257	0.025	0.213	0.403	1.823	1.339	1.415	0.675	0.001
10^thp	0.000	0.000	0.000	0.000	0.025	0.280	0.060	0.023	0.000	0.000
90^thp	3.421	1.001	0.065	0.526	0.867	3.949	3.052	3.700	1.656	0.000
Stdev	2.075	0.481	0.070	0.322	0.457	2.012	1.355	1.575	0.842	0.005
Prev(%)	84.416	63.636	32.468	72.727	90.909	94.805	96.104	93.506	85.714	2.597

Eren V3-V5 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	2.942	0.922	0.077	0.474	0.618	2.991	1.518	1.695	0.834	0.001
10^thp	0.112	0.000	0.000	0.000	0.042	0.606	0.143	0.107	0.010	0.000
90^thp	8.291	2.830	0.190	1.008	1.461	6.275	3.623	4.478	2.077	0.000
Stdev	4.280	1.582	0.225	1.167	0.904	2.991	1.618	2.281	1.042	0.004
Prev(%)	96.622	89.189	39.865	88.514	94.595	99.324	95.946	95.946	90.541	2.797

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.250	0.272	0.073	0.000	0.455	2.277	1.253	1.540	0.659	0.000	0.008	0.000	0.000	0.004	0.000	0.000	0.000	0.000
10^thp	0.022	0.000	0.000	0.000	0.000	0.223	0.032	0.118	0.006	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	3.108	0.750	0.065	0.000	1.167	4.944	2.951	3.657	1.581	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	1.757	0.481	0.533	0.000	0.592	2.485	1.257	1.451	0.713	0.000	0.061	0.000	0.000	0.025	0.000	0.000	0.000	0.000
Prev(%)	94.040	73.510	29.371	0.000	84.564	92.308	90.774	98.667	90.323	0.000	8.046	0.000	0.000	5.069	0.000	0.000	0.000	0.000

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	2.183	0.493	0.000	0.434	0.878	3.928	2.021	2.345	1.183	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
10^thp	0.059	0.000	0.000	0.000	0.000	0.592	0.035	0.152	0.016	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	5.885	1.381	0.000	1.193	2.317	8.493	4.734	5.587	3.276	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	3.368	0.818	0.000	0.737	1.069	3.905	2.143	2.429	1.457	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Prev(%)	94.815	81.707	0.000	77.667	83.632	98.810	91.277	96.837	90.998	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	3.193	0.780	0.218	0.519	0.390	1.838	1.307	1.343	0.623	0.000
10^thp	0.016	0.011	0.002	0.005	0.028	0.038	0.117	0.047	0.011	0.000
90^thp	7.744	1.502	0.625	1.691	0.848	7.261	2.708	3.637	1.728	0.000
Stdev	5.558	1.084	0.375	0.721	0.462	3.254	1.792	1.697	0.778	0.000
Prev(%)	97.297	100.000	90.698	97.143	100.000	100.000	100.000	96.774	97.500	0.000

Human Microbiome Project Metaphlan (not published) (data from healthy subjects)

No Notes

[Species:Segatella baroniae]	[Species:Segatella buccae]	[Species:Segatella maculosa]	[Species:Segatella oris]	[Species:Segatella oulorum]
[Species:Segatella salivae]	[Species:Segatella sp. HMT-300]	[Species:Segatella sp. HMT-305]	[Species:Segatella sp. HMT-309]	[Species:Segatella sp. HMT-443]

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