HOMD ::Genus:Ruminococcaceae [G2]

Genus: Ruminococcaceae [G2]

Full Lineage: Bacteria; Bacillota; Clostridia; Eubacteriales; Ruminococcaceae; Ruminococcaceae [G2] Each rank name is a link to abundance plots at that rank:

Lower rank member(s): [Species:Ruminococcaceae [G2] bacterium HMT-085]

LINKS: Ecology Home | Life Page: Ruminococcaceae [G2]

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Eren V1-V3 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.002	0.002	0.002	0.004	0.012	0.163	0.041	0.054	0.041	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.013	0.034	0.583	0.102	0.167	0.087	0.000
Stdev	0.007	0.011	0.016	0.015	0.022	0.318	0.116	0.104	0.105	0.000
Prev(%)	6.494	7.792	2.597	12.987	33.766	57.143	32.468	45.455	38.961	0.000

Eren V3-V5 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.015	0.009	0.002	0.013	0.038	0.447	0.127	0.099	0.062	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.027	0.015	0.000	0.048	0.118	1.289	0.423	0.329	0.167	0.000
Stdev	0.096	0.034	0.009	0.028	0.061	0.712	0.206	0.170	0.130	0.000
Prev(%)	14.189	10.811	6.757	24.324	45.946	74.324	61.486	54.730	50.000	0.000

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.019	0.000	0.000	0.011	0.047	0.493	0.124	0.140	0.069	0.003	0.000	0.000	0.010	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.017	0.000	0.000	0.036	0.105	1.454	0.352	0.261	0.153	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.130	0.000	0.000	0.022	0.122	0.835	0.208	0.586	0.132	0.040	0.000	0.000	0.072	0.000	0.000	0.000	0.000	0.000
Prev(%)	18.543	0.000	0.000	34.247	52.349	70.769	62.798	67.333	64.516	2.667	0.000	0.000	5.172	0.000	0.000	0.000	0.000	0.000

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.019	0.000	0.000	0.032	0.101	0.756	0.201	0.176	0.111	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.034	0.000	0.000	0.104	0.316	2.082	0.583	0.463	0.294	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.124	0.000	0.000	0.067	0.159	0.959	0.326	0.308	0.176	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Prev(%)	21.235	0.000	0.000	34.491	54.731	82.143	62.617	69.100	67.640	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.005	0.002	0.007	0.010	0.010	0.023	0.055	0.104	0.025	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.007	0.007	0.020	0.021	0.028	0.045	0.128	0.139	0.066	0.000
Stdev	0.025	0.007	0.021	0.019	0.017	0.036	0.065	0.274	0.032	0.000
Prev(%)	21.622	23.529	41.860	65.714	53.571	76.000	81.818	87.097	80.000	0.000

Human Microbiome Project Metaphlan (not published) (data from healthy subjects)

No Notes

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