HOMD ::Genus:Patescibacteria [C1 O1 F1 G1]

Taxonomy: V4.1 | 16S rRNA RefSeq: V16.03 | Genomic RefSeq: V11.02 | Viruses: V1.2

Genus: Patescibacteria [C1 O1 F1 G1]

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Full Lineage: Bacteria; Patescibacteria; Patescibacteria [C1]; Patescibacteria [C1 O1]; Patescibacteria [C1 O1 F1]; Patescibacteria [C1 O1 F1 G1] Each rank name is a link to abundance plots at that rank:

Lower rank member(s): [Species:Patescibacteria [C1 O1 F1 G1] bacterium HMT-871] [Species:Patescibacteria [C1 O1 F1 G1] bacterium HMT-872]

LINKS: Ecology Home | Life Page: Patescibacteria [C1 O1 F1 G1]

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

HMP 16S RefSeq (V1-V3) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.098	0.154	0.000	0.008	0.000	0.072	0.000	0.000	0.000	0.000	0.007	0.001	0.007	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.339	0.459	0.000	0.014	0.000	0.172	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.225	0.372	0.000	0.038	0.000	0.171	0.000	0.000	0.000	0.000	0.111	0.016	0.091	0.000	0.000	0.000	0.000	0.000
Prev(%)	45.695	47.020	0.000	17.123	0.000	43.077	0.000	0.000	0.000	0.000	1.437	0.567	1.149	0.000	0.000	0.000	0.000	0.000

HMP 16S RefSeq (V3-V5) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.114	0.171	0.000	0.000	0.000	0.072	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.373	0.507	0.000	0.000	0.000	0.238	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.282	0.421	0.000	0.000	0.000	0.161	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Prev(%)	44.938	46.341	0.000	0.000	0.000	39.881	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.105	0.084	0.001	0.004	0.007	0.003	0.001	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.059	0.324	0.003	0.014	0.018	0.004	0.004	0.000	0.000	0.000
Stdev	0.620	0.174	0.005	0.007	0.021	0.011	0.002	0.002	0.000	0.000
Prev(%)	37.838	58.824	18.605	28.571	25.000	26.000	24.242	9.677	5.000	0.000

HMP Metaphlan (not published)

No Notes

Eren V1-V3 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.152	0.169	0.001	0.007	0.008	0.054	0.006	0.002	0.001	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.555	0.469	0.000	0.017	0.018	0.148	0.008	0.000	0.000	0.000
Stdev	0.389	0.384	0.004	0.024	0.033	0.126	0.021	0.007	0.006	0.000
Prev(%)	37.662	41.558	2.597	15.584	15.584	40.260	10.390	6.494	3.896	0.000

Eren V3-V5 www.pnas.org

No Notes