HOMD ::Genus:Corynebacterium

Genus: Corynebacterium

Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Corynebacteriaceae; Corynebacterium Each rank name is a link to abundance plots at that rank:

Lower rank member(s): show[+]

LINKS: Ecology Home | Life Page: Corynebacterium

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

HMP 16S RefSeq (V1-V3) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	5.892	8.518	0.415	0.230	0.151	0.095	0.127	0.043	0.000	32.853	7.222	5.895	5.665	6.772	0.056	0.065	0.000	0.000
10^thp	0.290	0.638	0.000	0.000	0.000	0.000	0.000	0.000	0.000	5.428	0.067	0.046	0.164	0.284	0.000	0.000	0.000	0.000
90^thp	13.643	16.837	0.602	0.474	0.247	0.194	0.148	0.032	0.000	64.569	23.904	15.716	10.692	15.804	0.143	0.076	0.000	0.000
Stdev	5.593	6.528	1.946	0.435	0.546	0.216	0.844	0.411	0.000	22.171	12.953	12.163	8.800	9.086	0.149	0.294	0.000	0.000
Prev(%)	94.702	96.026	42.657	84.247	75.168	60.000	45.238	34.667	0.000	99.000	94.828	94.051	93.103	95.853	50.704	37.838	0.000	0.000

HMP 16S RefSeq (V3-V5) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	9.584	13.181	0.830	0.738	0.588	0.295	0.697	0.198	0.093	40.913	9.834	9.818	8.515	8.440	0.674	0.086	0.042	0.251
10^thp	0.672	2.313	0.000	0.000	0.000	0.000	0.000	0.000	0.000	7.313	0.072	0.061	0.029	0.121	0.000	0.000	0.000	0.000
90^thp	19.583	24.763	1.404	1.798	1.110	0.644	0.591	0.082	0.011	75.136	33.517	32.865	24.691	18.841	0.482	0.166	0.029	0.000
Stdev	8.115	8.722	3.797	2.041	3.153	0.766	3.882	3.259	0.523	25.027	19.066	19.337	11.299	11.210	3.117	0.404	0.415	4.335
Prev(%)	98.765	98.780	56.543	85.856	76.215	83.333	61.682	38.686	11.192	99.234	97.452	95.062	91.034	95.333	62.644	35.519	19.372	3.893

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	3.307	1.623	0.121	0.212	0.561	0.036	0.075	0.627	0.009	59.399
10^thp	0.034	0.068	0.000	0.009	0.033	0.003	0.000	0.000	0.000	10.885
90^thp	9.524	3.705	0.166	0.547	1.093	0.083	0.061	0.031	0.010	94.208
Stdev	6.091	1.817	0.334	0.297	1.136	0.047	0.283	3.430	0.034	30.260
Prev(%)	98.649	100.000	76.744	100.000	96.429	94.000	81.818	67.742	45.000	100.000

HMP Metaphlan (not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	7.915	11.333	6.453	0.764	0.464	0.000	0.182	0.051	0.039	0.110	23.352	2.997	1.613	1.410	0.066	1.536	0.112	0.120
10^thp	1.176	2.155	0.326	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.635	0.000	0.000	1.410	0.000	0.000	0.000	0.000
90^thp	18.310	21.365	10.285	0.978	1.265	0.000	0.415	0.075	0.006	0.090	50.697	8.128	2.479	1.410	0.340	0.059	0.000	0.071
Stdev	6.362	7.743	7.717	1.905	1.481	0.000	0.317	0.168	0.157	0.644	20.261	6.080	5.377	0.000	0.148	5.720	0.731	0.693
Prev(%)	100.000	98.485	95.833	52.941	64.096	0.000	62.500	18.750	12.000	33.333	92.793	79.167	71.875	100.000	18.182	21.429	9.596	13.455

Eren V1-V3 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	6.067	8.529	0.315	0.243	0.163	0.178	0.191	0.031	0.018	0.002
10^thp	0.430	1.164	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	13.251	17.617	0.184	0.921	0.466	0.444	0.219	0.100	0.065	0.000
Stdev	5.697	6.172	2.048	0.422	0.243	0.302	1.165	0.065	0.039	0.010
Prev(%)	96.104	96.104	46.753	81.818	81.818	70.130	46.753	41.558	32.468	3.896

Eren V3-V5 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	8.379	13.318	0.285	0.383	0.420	0.231	0.166	0.179	0.129	0.001
10^thp	1.337	2.970	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	18.056	24.220	0.204	0.940	0.563	0.597	0.364	0.198	0.167	0.000
Stdev	7.071	8.320	2.322	0.932	1.550	0.363	0.514	1.085	0.565	0.006
Prev(%)	98.649	99.324	35.811	82.432	81.081	80.405	64.189	54.730	51.351	4.196

[Species:Corynebacterium accolens]	[Species:Corynebacterium afermentans]	[Species:Corynebacterium amycolatum]	[Species:Corynebacterium appendicis]	[Species:Corynebacterium aurimucosum]
[Species:Corynebacterium bovis]	[Species:Corynebacterium coyleae]	[Species:Corynebacterium diphtheriae]	[Species:Corynebacterium durum]	[Species:Corynebacterium gottingense]
[Species:Corynebacterium hesseae]	[Species:Corynebacterium jeikeium]	[Species:Corynebacterium kefirresidentii]	[Species:Corynebacterium kroppenstedtii]	[Species:Corynebacterium macclintockiae]
[Species:Corynebacterium macginleyi]	[Species:Corynebacterium massiliense]	[Species:Corynebacterium mastitidis]	[Species:Corynebacterium matruchotii]	[Species:Corynebacterium minutissimum]
[Species:Corynebacterium mucifaciens]	[Species:Corynebacterium otitidis]	[Species:Corynebacterium pilbarense]	[Species:Corynebacterium propinquum]	[Species:Corynebacterium pseudodiphtheriticum]
[Species:Corynebacterium simulans]	[Species:Corynebacterium singulare]	[Species:Corynebacterium striatum]	[Species:Corynebacterium tuberculostearicum]	[Species:Corynebacterium tuscaniense]
[Species:Corynebacterium urealyticum]

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