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Genome Meta Information:
Actinomyces
radicidentis
SRR16280065_bin.9_MetaWRAP_v1.3_MAG (GCA_959607315.1)
| HOMD Genome-ID |
GCA_959607315.1
|
| HOMD Taxon-ID |
HMT-746
|
| Species Name (in use by HOMD) |
Actinomyces radicidentis
|
| Organism Name (as deposited) |
HMT-746 Actinomyces radicidentis SRR16280065_bin.9_MetaWRAP_v1.3_MAG
|
| Strain or Isolate |
SRR16280065_bin.9_MetaWRAP_v1.3_MAG
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;
s__Actinomyces radicidentis |
| Sequencing Technology |
Illumina HiSeq 2500
|
| Genome Coverage |
9.0x
|
| Contigs |
Number of Contigs: 249
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,799,563 (bp) |
| GC Percentage |
72.81
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/959/607/315/GCA_959607315.1_SRR16280065_bin.9_MetaWRAP_v1.3_MAG
|
| CDS |
2309
|
| Genes |
2377
|
| mRNA |
2377
|
| misc RNA |
15
|
| rRNA |
1
|
| tRNA |
51
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
98.53 %
|
| CheckM Completeness |
96.35 %
|
| CheckM Contamination |
2.37 %
|
| CheckM2 Completeness |
96.71 %
|
| CheckM2 Contamination |
0.42 %
|
| CRISPR-cas |
Ambiguous
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
SRR16280065_bin.9_MetaWRAP_v1.
|
| GenBank Assembly Accession |
GCA_959607315.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_959607315.1
[NCBI]
|
| BioSample |
SAMEA114122567
[NCBI]
|
| BioProject |
PRJEB63522
[NCBI]
|
| Submitter |
EMG
|
| Submission Date |
2023-07-22T10:01:03.740
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CAUHMM01
|
| NCBI TaxID |
111015
|
| Isolation Source |
human feces metagenome
|
| Geo Location |
China
|
