Genome Meta Information: Anaerovoracaceae [G5] saphenum ERR589642_bin.33_CONCOCT_v1.1_MAG (GCA_938044195.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_938044195.1 | ||
| HOMD Taxon-ID | HMT-759 | ||
| Species Name (in use by HOMD) | Anaerovoracaceae [G5] saphenum | ||
| Organism Name (as deposited) | HMT-759 Peptostreptococcaceae [G5 "Eubacterium"] saphenum ERR589642_bin.33_CONCOCT_v1.1_MAG | ||
| Strain or Isolate | ERR589642_bin.33_CONCOCT_v1.1_MAG | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__Eubacterium_N; s__Eubacterium_N saphenum |
||
| Sequencing Technology | Illumina HiSeq 2000 | ||
| Genome Coverage | 30.0x | ||
| Contigs |
|
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| Total Sequence Length | 1,072,173 (bp) | ||
| GC Percentage | 40.22 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/044/195/GCA_938044195.1_ERR589642_bin.33_CONCOCT_v1.1_MAG | ||
| CDS | 927 | ||
| Genes | 959 | ||
| mRNA | 959 | ||
| misc RNA | 8 | ||
| rRNA | 0 | ||
| tRNA | 23 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 88.42 % | ||
| CheckM Contamination | 0.71 % | ||
| CheckM2 Completeness | 97.2 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ERR589642_bin.33_CONCOCT_v1.1_ |
| GenBank Assembly Accession | GCA_938044195.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMEA14084856 [NCBI] |
| BioProject | PRJEB51075 [NCBI] |
| Submitter | European Bioinformatics Institute |
| Submission Date | 2023-01-04T08:31:46.076 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CALIQD01 |
| NCBI TaxID | 51123 |
| Isolation Source | human gut metagenome |
| Geo Location | China |
