Genome Meta Information: Actinomyces graevenitzii ERR589702_bin.71_CONCOCT_v1.1_MAG (GCA_938043945.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_938043945.1 | ||
| HOMD Taxon-ID | HMT-866 | ||
| Species Name (in use by HOMD) | Actinomyces graevenitzii | ||
| Organism Name (as deposited) | HMT-866 Actinomyces graevenitzii ERR589702_bin.71_CONCOCT_v1.1_MAG | ||
| Strain or Isolate | ERR589702_bin.71_CONCOCT_v1.1_MAG | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces graevenitzii |
||
| Sequencing Technology | Illumina HiSeq 2000 | ||
| Genome Coverage | 99.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,140,962 (bp) | ||
| GC Percentage | 57.65 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/043/945/GCA_938043945.1_ERR589702_bin.71_CONCOCT_v1.1_MAG | ||
| CDS | 1772 | ||
| Genes | 1831 | ||
| mRNA | 1831 | ||
| misc RNA | 9 | ||
| rRNA | 1 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0.47 % | ||
| CheckM2 Completeness | 99.79 % | ||
| CheckM2 Contamination | 0.5 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ERR589702_bin.71_CONCOCT_v1.1_ |
| GenBank Assembly Accession | GCA_938043945.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMEA14084947 [NCBI] |
| BioProject | PRJEB51075 [NCBI] |
| Submitter | European Bioinformatics Institute |
| Submission Date | 2023-01-04T08:31:49.960 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CALIQV01 |
| NCBI TaxID | 55565 |
| Isolation Source | human gut metagenome |
| Geo Location | China |
