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Genome Meta Information:
Prevotella melaninogenica ERR589382_bin.2_CONCOCT_v1.1_MAG (GCA_938042185.1)
| HOMD Genome-ID | GCA_938042185.1 |
| HOMD Taxon-ID |
HMT-469
|
| Species Name (in use by HOMD) | Prevotella melaninogenica |
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica ERR589382_bin.2_CONCOCT_v1.1_MAG |
| Strain or Isolate | ERR589382_bin.2_CONCOCT_v1.1_MAG |
| GTDB Taxonomy | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella melaninogenica_A |
| Sequencing Technology | Illumina HiSeq 2000 |
| Genome Coverage | 10.0x |
| Contigs |
Number of Contigs: 108
|
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|
| Total Sequence Length | 3,042,679 (bp) |
| GC Percentage | 40.71 |
| MAG | yes |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/042/185/GCA_938042185.1_ERR589382_bin.2_CONCOCT_v1.1_MAG |
| CDS | 2392 |
| Genes | 2446 |
| mRNA | 2446 |
| misc RNA | 8 |
| rRNA | 1 |
| tRNA | 44 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
View in Anvi`o: Prevotella__melaninogenica__HMT_469
(Interactive)
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|
| Genome Assembly Name | ERR589382_bin.2_CONCOCT_v1.1_M |
| GenBank Assembly Accession |
GCA_938042185.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
SAMEA14084593
[NCBI]
|
| BioProject |
PRJEB51075
[NCBI]
|
| Submitter | European Bioinformatics Institute |
| Submission Date | 2023-01-04T08:31:36.383 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project |
CALIRV01
|
| NCBI TaxID |
28132
|
| Isolation Source | human gut metagenome |
| Geo Location | China |
| ANI (Average Nucluotide Identity) | 90.57 % |
| CheckM Completeness | 89.4 % |
| CheckM Percentile | 45 % |
| CheckM Contamination | 2.04 % |
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