Genome Meta Information: Aggregatibacter kilianii SRR2240840_bin.2_CONCOCT_v1.1_MAG (GCA_937919835.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_937919835.1 | ||
| HOMD Taxon-ID | HMT-426 | ||
| Species Name (in use by HOMD) | Aggregatibacter kilianii | ||
| Organism Name (as deposited) | HMT-426 Aggregatibacter kilianii SRR2240840_bin.2_CONCOCT_v1.1_MAG | ||
| Strain or Isolate | SRR2240840_bin.2_CONCOCT_v1.1_MAG | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter; s__Aggregatibacter kilianii |
||
| Sequencing Technology | Illumina HiSeq 2000 | ||
| Genome Coverage | 24.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,304,117 (bp) | ||
| GC Percentage | 42.61 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/919/835/GCA_937919835.1_SRR2240840_bin.2_CONCOCT_v1.1_MAG | ||
| CDS | 2139 | ||
| Genes | 2239 | ||
| mRNA | 2239 | ||
| misc RNA | 62 | ||
| rRNA | 2 | ||
| tRNA | 35 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.18 % | ||
| CheckM Completeness | 97.84 % | ||
| CheckM Contamination | 0.25 % | ||
| CheckM2 Completeness | 98.22 % | ||
| CheckM2 Contamination | 0.01 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | SRR2240840_bin.2_CONCOCT_v1.1_ |
| GenBank Assembly Accession | GCA_937919835.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_937919835.1 [NCBI] |
| BioSample | SAMEA14075808 [NCBI] |
| BioProject | PRJEB50943 [NCBI] |
| Submitter | European Bioinformatics Institute |
| Submission Date | 2023-01-04T08:29:41.410 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CALFOU01 |
| NCBI TaxID | 2025884 |
| Isolation Source | metagenome |
| Geo Location | not provided |
