Genome Meta Information: Absconditicoccaceae [G1] bacterium HMT-875 SRR15235650_bin.7_metaWRAP_v1.1_MAG (GCA_916720055.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_916720055.1 | ||
| HOMD Taxon-ID | HMT-875 | ||
| Species Name (in use by HOMD) | Absconditicoccaceae [G1] bacterium HMT-875 | ||
| Organism Name (as deposited) | HMT-875 Absconditicoccaceae [G1] bacterium HMT-875 SRR15235650_bin.7_metaWRAP_v1.1_MAG | ||
| Strain or Isolate | SRR15235650_bin.7_metaWRAP_v1.1_MAG | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Patescibacteriota;c__JAEDAM01;o__Absconditabacterales;f__Absconditicoccaceae;g__HOT-345; s__HOT-345 sp013333295 |
||
| Sequencing Technology | |||
| Genome Coverage | 9.0x | ||
| Contigs |
|
||
| Total Sequence Length | 800,111 (bp) | ||
| GC Percentage | 35.29 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/916/720/055/GCA_916720055.1_SRR15235650_bin.7_metaWRAP_v1.1_MAG | ||
| CDS | 1441 | ||
| Genes | 1478 | ||
| mRNA | 1478 | ||
| misc RNA | 3 | ||
| rRNA | 0 | ||
| tRNA | 33 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 67.6 % | ||
| CheckM Contamination | 1.24 % | ||
| CheckM2 Completeness | 91.2 % | ||
| CheckM2 Contamination | 0.7 % | ||
| Difference
between CheckM and CheckM2 Completeness |
29.7 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | SRR15235650_bin.7_metaWRAP_v1. |
| GenBank Assembly Accession | GCA_916720055.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMEA10220517 [NCBI] |
| BioProject | PRJEB47694 [NCBI] |
| Submitter | EMG |
| Submission Date | 2021-10-01T10:19:23.449 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CAKAQI01 |
| NCBI TaxID | 77133 |
| Isolation Source | human saliva metagenome |
| Geo Location | not provided |
