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Genome Meta Information:
Acidovorax
temperans
SP39_3_metabat2_genome_mining.9 (GCA_913778555.1)
| HOMD Genome-ID |
GCA_913778555.1
|
| HOMD Taxon-ID |
HMT-216
|
| Species Name (in use by HOMD) |
Acidovorax temperans
|
| Organism Name (as deposited) |
HMT-216 Acidovorax temperans SP39_3_metabat2_genome_mining.9
|
| Strain or Isolate |
SP39_3_metabat2_genome_mining.9
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax;
s__Acidovorax temperans |
| Sequencing Technology |
|
| Genome Coverage |
1.0x
|
| Contigs |
Number of Contigs: 232
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
3,703,556 (bp) |
| GC Percentage |
63.47
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/913/778/555/GCA_913778555.1_SP39_3_metabat2_genome_mining.9
|
| CDS |
3467
|
| Genes |
3530
|
| mRNA |
3530
|
| misc RNA |
28
|
| rRNA |
1
|
| tRNA |
33
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
94 %
|
| CheckM Contamination |
1.27 %
|
| CheckM2 Completeness |
86.77 %
|
| CheckM2 Contamination |
0.74 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes (Beta) |
No Pangenomes Available.
|
| Genome Assembly Name |
SP39_3_metabat2_genome_mining.
|
| GenBank Assembly Accession |
GCA_913778555.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_913778555.1
[NCBI]
|
| BioSample |
SAMEA8944494
[NCBI]
|
| BioProject |
PRJEB45634
[NCBI]
|
| Submitter |
INSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY
|
| Submission Date |
2021-09-04T16:18:32.278
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CAJYUT01
|
| NCBI TaxID |
158751
|
| Isolation Source |
phyllosphere_metagenome_of_Oryza sativa
|
| Geo Location |
China
|
