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Genome Meta Information:
Abiotrophia
sp. HMT-427
SRR9217435-mag-bin.2 (GCA_905372995.1)
| HOMD Genome-ID |
GCA_905372995.1
|
| HOMD Taxon-ID |
HMT-427
|
| Species Name (in use by HOMD) |
Abiotrophia sp. HMT-427
|
| Organism Name (as deposited) |
HMT-427 Abiotrophia sp. HMT-427 SRR9217435-mag-bin.2
|
| Strain or Isolate |
SRR9217435-mag-bin.2
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Abiotrophia;
s__Abiotrophia sp001815865 |
| Sequencing Technology |
|
| Genome Coverage |
10.0x
|
| Contigs |
Number of Contigs: 142
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
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|
|
| Total Sequence Length |
1,841,231 (bp) |
| GC Percentage |
46.95
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/905/372/995/GCA_905372995.1_SRR9217435-mag-bin.2
|
| CDS |
1672
|
| Genes |
1717
|
| mRNA |
1717
|
| misc RNA |
20
|
| rRNA |
0
|
| tRNA |
24
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
94.82 %
|
| CheckM Contamination |
0.62 %
|
| CheckM2 Completeness |
94.7 %
|
| CheckM2 Contamination |
0.53 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes (Beta) |
View in Anvi`o:
Abiotrophia__sp_HMT_427__HMT_427
(Interactive)
View SVG Image
|
| Genome Assembly Name |
SRR9217435-mag-bin.2
|
| GenBank Assembly Accession |
GCA_905372995.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_905372995.1
[NCBI]
|
| BioSample |
SAMEA8395220
[NCBI]
|
| BioProject |
PRJEB43277
[NCBI]
|
| Submitter |
EMG
|
| Submission Date |
2021-03-24T08:55:26.000
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CAJPRA01
|
| NCBI TaxID |
1581061
|
| Isolation Source |
not provided
|
| Geo Location |
not provided
|
