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Genome Meta Information:
Prevotella
melaninogenica
DRR241310-mag-bin.4 (GCA_905370375.1)
| HOMD Genome-ID |
GCA_905370375.1
|
| HOMD Taxon-ID |
HMT-469
|
| Species Name (in use by HOMD) |
Prevotella melaninogenica
|
| Organism Name (as deposited) |
HMT-469 Prevotella melaninogenica DRR241310-mag-bin.4
|
| Strain or Isolate |
DRR241310-mag-bin.4
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella melaninogenica |
| Sequencing Technology |
|
| Genome Coverage |
49.0x
|
| Contigs |
Number of Contigs: 190
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
3,187,960 (bp) |
| GC Percentage |
40.82
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/905/370/375/GCA_905370375.1_DRR241310-mag-bin.4
|
| CDS |
2522
|
| Genes |
2578
|
| mRNA |
2578
|
| misc RNA |
12
|
| rRNA |
1
|
| tRNA |
41
|
| tmRNA |
2
|
| ANI (Average Nucluotide Identity) |
96.54 %
|
| CheckM Completeness |
96.85 %
|
| CheckM Contamination |
0.11 %
|
| CheckM2 Completeness |
95.73 %
|
| CheckM2 Contamination |
0.05 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
DRR241310-mag-bin.4
|
| GenBank Assembly Accession |
GCA_905370375.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
SAMEA8391528
[NCBI]
|
| BioProject |
PRJEB43272
[NCBI]
|
| Submitter |
EMG
|
| Submission Date |
2021-03-24T08:54:43.560
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CAJPKL01
|
| NCBI TaxID |
28132
|
| Isolation Source |
Human saliva
|
| Geo Location |
not provided
|
