Genome Meta Information: Aggregatibacter segnis MGYG-HGUT-04313 (GCA_902494125.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_902494125.1 | ||
| HOMD Taxon-ID | HMT-762 | ||
| Species Name (in use by HOMD) | Aggregatibacter segnis | ||
| Organism Name (as deposited) | HMT-762 Aggregatibacter segnis MGYG-HGUT-04313 | ||
| Strain or Isolate | MGYG-HGUT-04313 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter; s__Aggregatibacter segnis_B |
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| Sequencing Technology | |||
| Genome Coverage | 10.0x | ||
| Contigs |
|
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| Total Sequence Length | 1,916,258 (bp) | ||
| GC Percentage | 42.71 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/494/125/GCA_902494125.1_UHGG-TPA_MGYG-HGUT-04313 | ||
| CDS | 1770 | ||
| Genes | 1918 | ||
| mRNA | 1918 | ||
| misc RNA | 97 | ||
| rRNA | 3 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.66 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.97 % | ||
| CheckM2 Contamination | 0.03 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | UHGG-TPA_MGYG-HGUT-04313 |
| GenBank Assembly Accession | GCA_902494125.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_902494125.1 [NCBI] |
| BioSample | SAMEA5853820 [NCBI] |
| BioProject | PRJEB33885 [NCBI] |
| Submitter | EMG |
| Submission Date | 2019-08-07T10:19:26.700 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CABURO01 |
| NCBI TaxID | 470564 |
| Isolation Source | human gut |
| Geo Location | not provided |
