Back To Genome Table
Genome Meta Information:
Anaerococcus
lactolyticus
MGYG-HGUT-03780 (GCA_902489065.1)
| HOMD Genome-ID |
GCA_902489065.1
|
| HOMD Taxon-ID |
HMT-859
|
| Species Name (in use by HOMD) |
Anaerococcus lactolyticus
|
| Organism Name (as deposited) |
HMT-859 Anaerococcus lactolyticus MGYG-HGUT-03780
|
| Strain or Isolate |
MGYG-HGUT-03780
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus;
s__Anaerococcus lactolyticus |
| Sequencing Technology |
|
| Genome Coverage |
10.0x
|
| Contigs |
Number of Contigs: 150
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
1,433,043 (bp) |
| GC Percentage |
35.94
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/489/065/GCA_902489065.1_UHGG-TPA_MGYG-HGUT-03780
|
| CDS |
1335
|
| Genes |
1370
|
| mRNA |
1370
|
| misc RNA |
19
|
| rRNA |
0
|
| tRNA |
16
|
| tmRNA |
0
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
68.74 %
|
| CheckM Contamination |
1.52 %
|
| CheckM2 Completeness |
65.59 %
|
| CheckM2 Contamination |
3.1 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP Site]
|
| Pangenomes (Beta) |
No Pangenomes Available.
|
| Genome Assembly Name |
UHGG-TPA_MGYG-HGUT-03780
|
| GenBank Assembly Accession |
GCA_902489065.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
SAMEA5853286
[NCBI]
|
| BioProject |
PRJEB33885
[NCBI]
|
| Submitter |
EMG
|
| Submission Date |
2019-08-07T10:19:08.340
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CABTYQ01
|
| NCBI TaxID |
293428
|
| Isolation Source |
human gut
|
| Geo Location |
not provided
|
