Genome Meta Information: Anaerococcus octavius MGYG-HGUT-03129 (GCA_902482765.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_902482765.1 | ||
| HOMD Taxon-ID | HMT-017 | ||
| Species Name (in use by HOMD) | Anaerococcus octavius | ||
| Organism Name (as deposited) | HMT-017 Anaerococcus octavius MGYG-HGUT-03129 | ||
| Strain or Isolate | MGYG-HGUT-03129 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus; s__Anaerococcus octavius |
||
| Sequencing Technology | |||
| Genome Coverage | 10.0x | ||
| Contigs |
|
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| Total Sequence Length | 1,715,963 (bp) | ||
| GC Percentage | 30.3 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/482/765/GCA_902482765.1_UHGG-TPA_MGYG-HGUT-03129 | ||
| CDS | 1606 | ||
| Genes | 1647 | ||
| mRNA | 1647 | ||
| misc RNA | 26 | ||
| rRNA | 0 | ||
| tRNA | 14 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.23 % | ||
| CheckM Contamination | 0.91 % | ||
| CheckM2 Completeness | 92.52 % | ||
| CheckM2 Contamination | 0.82 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP Site] | ||
| Pangenomes (Beta) | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | UHGG-TPA_MGYG-HGUT-03129 |
| GenBank Assembly Accession | GCA_902482765.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_902482765.1 [NCBI] |
| BioSample | SAMEA5852634 [NCBI] |
| BioProject | PRJEB33885 [NCBI] |
| Submitter | EMG |
| Submission Date | 2019-08-07T10:18:46.680 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CABTAM01 |
| NCBI TaxID | 293428 |
| Isolation Source | human gut |
| Geo Location | USA |
