Genome Meta Information: Stomatobaculum longum MGYG-HGUT-03001 (GCA_902481595.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_902481595.1 | ||
| HOMD Taxon-ID | HMT-419 | ||
| Species Name (in use by HOMD) | Stomatobaculum longum | ||
| Organism Name (as deposited) | HMT-419 Stomatobaculum longum MGYG-HGUT-03001 | ||
| Strain or Isolate | MGYG-HGUT-03001 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Moryella; s__Moryella longum |
||
| Sequencing Technology | |||
| Genome Coverage | 10.0x | ||
| Contigs |
|
||
| Total Sequence Length | 1,905,072 (bp) | ||
| GC Percentage | 56.08 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/481/595/GCA_902481595.1_UHGG-TPA_MGYG-HGUT-03001 | ||
| CDS | 1750 | ||
| Genes | 1799 | ||
| mRNA | 1799 | ||
| misc RNA | 10 | ||
| rRNA | 0 | ||
| tRNA | 38 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 92.72 % | ||
| CheckM Contamination | 0.63 % | ||
| CheckM2 Completeness | 94.76 % | ||
| CheckM2 Contamination | 0.35 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | UHGG-TPA_MGYG-HGUT-03001 |
| GenBank Assembly Accession | GCA_902481595.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_902481595.1 [NCBI] |
| BioSample | SAMEA5852506 [NCBI] |
| BioProject | PRJEB33885 [NCBI] |
| Submitter | EMG |
| Submission Date | 2019-08-07T10:18:42.726 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CABSWU01 |
| NCBI TaxID | 1662277 |
| Isolation Source | human gut |
| Geo Location | USA |
