Genome Meta Information: Aggregatibacter actinomycetemcomitans NCTC9709 (GCA_900445165.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900445165.1 | ||
| HOMD Taxon-ID | HMT-531 | ||
| Species Name (in use by HOMD) | Aggregatibacter actinomycetemcomitans | ||
| Organism Name (as deposited) | HMT-531 Aggregatibacter actinomycetemcomitans NCTC9709 | ||
| Strain or Isolate | NCTC9709 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter; s__Aggregatibacter actinomycetemcomitans |
||
| Sequencing Technology | |||
| Genome Coverage | 100.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,089,682 (bp) | ||
| GC Percentage | 44.53 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/445/165/GCA_900445165.1_55433_A01 | ||
| CDS | 1959 | ||
| Genes | 2106 | ||
| mRNA | 2106 | ||
| misc RNA | 56 | ||
| rRNA | 27 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.89 % | ||
| CheckM Completeness | 99.89 % | ||
| CheckM Contamination | 0.45 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 55433_A01 |
| GenBank Assembly Accession | GCA_900445165.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900445165.1 [NCBI] |
| BioSample | SAMEA104062577 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2017-09-30T08:08:53.266 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UFSG01 |
| NCBI TaxID | 714 |
| Isolation Source | Abscess |
| Geo Location | Denmark: Copenhagen |
