Genome Meta Information: Alloprevotella sp. HMT-413 Marseille-P2826 (GCA_900095835.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900095835.1 | ||
| HOMD Taxon-ID | HMT-413 | ||
| Species Name (in use by HOMD) | Alloprevotella sp. HMT-413 | ||
| Organism Name (as deposited) | HMT-413 Alloprevotella sp. HMT-413 Marseille-P2826 | ||
| Strain or Isolate | Marseille-P2826 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Alloprevotella; s__Alloprevotella massiliensis |
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| Sequencing Technology | |||
| Genome Coverage | 120.0x | ||
| Contigs |
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| Total Sequence Length | 2,771,606 (bp) | ||
| GC Percentage | 47.7 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/835/GCA_900095835.1_PRJEB15302 | ||
| CDS | 2188 | ||
| Genes | 2286 | ||
| mRNA | 2286 | ||
| misc RNA | 7 | ||
| rRNA | 22 | ||
| tRNA | 68 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 97.3 % | ||
| CheckM Contamination | 1.49 % | ||
| CheckM2 Completeness | 96.04 % | ||
| CheckM2 Contamination | 1.07 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP Site] | ||
| Pangenomes (Beta) |
View in Anvi`o:
Alloprevotella__sp_HMT_413__HMT_413
(Interactive)
View SVG Image |
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | PRJEB15302 |
| GenBank Assembly Accession | GCA_900095835.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900095835.1 [NCBI] |
| BioSample | SAMEA4415111 [NCBI] |
| BioProject | PRJEB15302 [NCBI] |
| Submitter | URMITE |
| Submission Date | 2016-09-29T09:38:01.130 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | FMIU01 |
| NCBI TaxID | 1852368 |
| Isolation Source | |
| Geo Location | |
