Genome Meta Information: Corynebacterium striatum 640X (GCA_030844955.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030844955.1 | ||
| HOMD Taxon-ID | HMT-072 | ||
| Species Name (in use by HOMD) | Corynebacterium striatum | ||
| Organism Name (as deposited) | HMT-072 Corynebacterium striatum 640X | ||
| Strain or Isolate | 640X | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium striatum |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 74.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,868,045 (bp) | ||
| GC Percentage | 59.26 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/844/955/GCA_030844955.1_ASM3084495v1 | ||
| CDS | 2633 | ||
| Genes | 2704 | ||
| mRNA | 2704 | ||
| misc RNA | 8 | ||
| rRNA | 6 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.72 % | ||
| CheckM Completeness | 99.23 % | ||
| CheckM Contamination | 0.26 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.21 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3084495v1 |
| GenBank Assembly Accession | GCA_030844955.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030844955.1 [NCBI] |
| BioSample | SAMN34403529 [NCBI] |
| BioProject | PRJNA962523 [NCBI] |
| Submitter | Northumbria University |
| Submission Date | 2023-04-27T12:33:24.927 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JASNMJ01 |
| NCBI TaxID | 43770 |
| Isolation Source | Corneal Scrape |
| Geo Location | United Kingdom: Newcastle upon |
