Genome Meta Information: Mogibacterium diversum RAGGC_219 (GCA_030825185.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030825185.1 | ||
| HOMD Taxon-ID | HMT-593 | ||
| Species Name (in use by HOMD) | Mogibacterium diversum | ||
| Organism Name (as deposited) | HMT-593 Mogibacterium diversum RAGGC_219 | ||
| Strain or Isolate | RAGGC_219 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__Mogibacterium; s__Mogibacterium diversum |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 9.4x | ||
| Contigs |
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| Total Sequence Length | 1,546,418 (bp) | ||
| GC Percentage | 41.61 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/825/185/GCA_030825185.1_ASM3082518v1 | ||
| CDS | 1366 | ||
| Genes | 1400 | ||
| mRNA | 1400 | ||
| misc RNA | 12 | ||
| rRNA | 0 | ||
| tRNA | 21 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.88 % | ||
| CheckM Completeness | 95.74 % | ||
| CheckM Contamination | 0.47 % | ||
| CheckM2 Completeness | 91.48 % | ||
| CheckM2 Contamination | 0.18 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) |
View in Anvi`o:
Mogibacterium__diversum__HMT_593
(Interactive)
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3082518v1 |
| GenBank Assembly Accession | GCA_030825185.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030825185.1 [NCBI] |
| BioSample | SAMN31428367 [NCBI] |
| BioProject | PRJNA872116 [NCBI] |
| Submitter | NHGRI/NIH |
| Submission Date | 2022-10-24T13:21:05.546 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAPJQJ01 |
| NCBI TaxID | 114527 |
| Isolation Source | human gut |
| Geo Location | USA |
