Genome Meta Information: Streptococcus gordonii SG1 (GCA_030439935.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030439935.1 | ||
| HOMD Taxon-ID | HMT-622 | ||
| Species Name (in use by HOMD) | Streptococcus gordonii | ||
| Organism Name (as deposited) | HMT-622 Streptococcus gordonii SG1 | ||
| Strain or Isolate | SG1 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus gordonii |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 51.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,187,339 (bp) | ||
| GC Percentage | 40.31 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/439/935/GCA_030439935.1_ASM3043993v1 | ||
| CDS | 2078 | ||
| Genes | 2157 | ||
| mRNA | 2157 | ||
| misc RNA | 28 | ||
| rRNA | 4 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.1 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3043993v1 |
| GenBank Assembly Accession | GCA_030439935.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030439935.1 [NCBI] |
| BioSample | SAMN32527084 [NCBI] |
| BioProject | PRJNA917188 [NCBI] |
| Submitter | University Hospital Dresden |
| Submission Date | 2023-01-01T17:07:03.953 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAQFJC01 |
| NCBI TaxID | 3018243 |
| Isolation Source | sputum |
| Geo Location | Germany |
