Genome Meta Information: Actinomyces oris ET81 (GCA_030371665.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030371665.1 | ||
| HOMD Taxon-ID | HMT-169 | ||
| Species Name (in use by HOMD) | Actinomyces oris | ||
| Organism Name (as deposited) | HMT-169 Actinomyces oris clade-169 ET81 | ||
| Strain or Isolate | ET81 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces sp915069725 |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 124.0x | ||
| Contigs |
|
||
| Total Sequence Length | 3,006,394 (bp) | ||
| GC Percentage | 68.76 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/371/665/GCA_030371665.1_ASM3037166v1 | ||
| CDS | 2450 | ||
| Genes | 2520 | ||
| mRNA | 2520 | ||
| misc RNA | 13 | ||
| rRNA | 3 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 88.31 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0.95 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.14 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3037166v1 |
| GenBank Assembly Accession | GCA_030371665.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030371665.1 [NCBI] |
| BioSample | SAMN34359484 [NCBI] |
| BioProject | PRJNA377666 [NCBI] |
| Submitter | Veterinary Research Institute |
| Submission Date | 2023-04-25T06:32:09.417 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAUDBR01 |
| NCBI TaxID | 1656 |
| Isolation Source | caecum |
| Geo Location | not applicable |
