Genome Meta Information: Corynebacterium pseudodiphtheriticum KPL3772 (GCA_030176235.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030176235.1 | ||
| HOMD Taxon-ID | HMT-060 | ||
| Species Name (in use by HOMD) | Corynebacterium pseudodiphtheriticum | ||
| Organism Name (as deposited) | HMT-060 Corynebacterium pseudodiphtheriticum KPL3772 | ||
| Strain or Isolate | KPL3772 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium pseudodiphtheriticum |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 93.0x | ||
| Contigs |
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| Total Sequence Length | 2,361,786 (bp) | ||
| GC Percentage | 55.28 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/176/235/GCA_030176235.1_ASM3017623v1 | ||
| CDS | 2132 | ||
| Genes | 2190 | ||
| mRNA | 2190 | ||
| misc RNA | 6 | ||
| rRNA | 4 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.28 % | ||
| CheckM Completeness | 99.67 % | ||
| CheckM Contamination | 0.11 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.34 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3017623v1 |
| GenBank Assembly Accession | GCA_030176235.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030176235.1 [NCBI] |
| BioSample | SAMN35023411 [NCBI] |
| BioProject | PRJNA842433 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2023-05-10T13:53:17.776 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JASNUQ01 |
| NCBI TaxID | 37637 |
| Isolation Source | |
| Geo Location | USA |
