Genome Meta Information: Acidovorax temperans LMJ (GCA_028596105.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_028596105.1 | ||
| HOMD Taxon-ID | HMT-216 | ||
| Species Name (in use by HOMD) | Acidovorax temperans | ||
| Organism Name (as deposited) | HMT-216 Acidovorax temperans LMJ | ||
| Strain or Isolate | LMJ | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax; s__Acidovorax temperans |
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| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 2535.7x | ||
| Contigs |
|
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| Total Sequence Length | 4,730,769 (bp) | ||
| GC Percentage | 63.18 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/028/596/105/GCA_028596105.1_ASM2859610v1 | ||
| CDS | 4411 | ||
| Genes | 4515 | ||
| mRNA | 4515 | ||
| misc RNA | 38 | ||
| rRNA | 12 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.43 % | ||
| CheckM Completeness | 99.49 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.64 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2859610v1 |
| GenBank Assembly Accession | GCA_028596105.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_028596105.1 [NCBI] |
| BioSample | SAMN33025486 [NCBI] |
| BioProject | PRJNA930884 [NCBI] |
| Submitter | University of West Georgia |
| Submission Date | 2023-02-02T17:14:04.760 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 80878 |
| Isolation Source | Acidovorax temperans strain LMJ was isolated from a contaminated Tris Acetate Ph |
| Geo Location | USA:Georgia |
