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Genome Meta Information:
Corynebacterium pilbarense CCUG 57942 (GCA_026930265.1)
| HOMD Genome-ID | GCA_026930265.1 |
| HOMD Taxon-ID |
HMT-054
|
| Species Name (in use by HOMD) | Corynebacterium pilbarense |
| Organism Name (as deposited) | HMT-054 Corynebacterium pilbarense CCUG 57942 |
| Strain or Isolate | CCUG 57942 |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium;
s__Corynebacterium pilbarense |
| Sequencing Technology | Illumina |
| Genome Coverage | 100.0x |
| Contigs |
Number of Contigs: 161
|
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|
| Total Sequence Length | 2,436,250 (bp) |
| GC Percentage | 64.17 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/930/265/GCA_026930265.1_ASM2693026v1 |
| CDS | 2197 |
| Genes | 2266 |
| mRNA | 2266 |
| misc RNA | 8 |
| rRNA | 7 |
| tRNA | 53 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
No Pangenomes Available
|
|
| Genome Assembly Name | ASM2693026v1 |
| GenBank Assembly Accession |
GCA_026930265.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_026930265.1
[NCBI]
|
| BioSample |
SAMN30225186
[NCBI]
|
| BioProject |
PRJNA868159
[NCBI]
|
| Submitter | Guangdong Provincial Hospital of Traditional Chinese Medicine |
| Submission Date | 2022-08-10T05:39:03.387 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project |
JANRML01
|
| NCBI TaxID |
1288393
|
| Isolation Source | ankle aspirate fluid from male patient |
| Geo Location | China: Guangzhou |
| ANI (Average Nucluotide Identity) | 99.99 % |
| CheckM Completeness | 97.67 % |
| CheckM Percentile | 66.666664 % |
| CheckM Contamination | 0.48 % |
|
