Genome Meta Information: Bacteroides caccae BFG-254 (GCA_024787725.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024787725.1 | ||
| HOMD Taxon-ID | HMT-967 | ||
| Species Name (in use by HOMD) | Bacteroides caccae | ||
| Organism Name (as deposited) | HMT-967 Bacteroides caccae BFG-254 | ||
| Strain or Isolate | BFG-254 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides; s__Bacteroides caccae |
||
| Sequencing Technology | Oxford Nanopore GridION | ||
| Genome Coverage | 310.0x | ||
| Contigs |
|
||
| Total Sequence Length | 5,195,543 (bp) | ||
| GC Percentage | 42.59 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/787/725/GCA_024787725.1_ASM2478772v1 | ||
| CDS | 4653 | ||
| Genes | 4754 | ||
| mRNA | 4754 | ||
| misc RNA | 18 | ||
| rRNA | 15 | ||
| tRNA | 67 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.4 % | ||
| CheckM Completeness | 99.07 % | ||
| CheckM Contamination | 0.97 % | ||
| CheckM2 Completeness | 99.28 % | ||
| CheckM2 Contamination | 1.92 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2478772v1 |
| GenBank Assembly Accession | GCA_024787725.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN30323242 [NCBI] |
| BioProject | PRJNA646575 [NCBI] |
| Submitter | National Institute of Allergy and Infectious Disease |
| Submission Date | 2022-08-15T15:49:05.663 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JANUIE01 |
| NCBI TaxID | 47678 |
| Isolation Source | |
| Geo Location | USA: Bethesda |
